Evidence map›Paper›PMID 32801084›Full record

ArticleOral oncology2020

Evaluation of antioxidant network proteins as novel prognostic biomarkers for head and neck cancer patients.

Christina A Wicker, Vinita Takiar, Rangaswamy Suganya, Susanne M Arnold, Yolanda M Brill, Li Chen, Craig M Horbinski, Dana Napier, Joseph Valentino, Mahesh R Kudrimoti and 2 more

Open access · greenAbstract read
In one paragraph

Article in Oral oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

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  11. Integrated Analysis RevealsFrontiers in oncology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Christina A WickerDepartment of Radiation Oncology, University of Cincinnati, Cincinnati, OH, United States.
Vinita TakiarDepartment of Radiation Oncology, University of Cincinnati, Cincinnati, OH, United States.
Rangaswamy SuganyaHouston Eye Associates, Clinical Research Department, Houston, TX, United States.
Susanne M ArnoldDepartment of Internal Medicine, University of Kentucky, Lexington, KY, United States; Markey Cancer Center, University of Kentucky, Lexington, KY, United States.
Yolanda M BrillDepartment of Pathology, University of Kentucky, Lexington, KY, United States.
Li ChenDepartment of Internal Medicine, University of Kentucky, Lexington, KY, United States; Markey Cancer Center, University of Kentucky, Lexington, KY, United States.
Craig M HorbinskiDepartment of Pathology, Northwestern University, Chicago, IL, United States.
Dana NapierMarkey Cancer Center, University of Kentucky, Lexington, KY, United States.
Joseph ValentinoDepartment of Otolaryngology, University of Kentucky, Lexington, KY, United States.
Mahesh R KudrimotiDepartment of Radiation Medicine, University of Kentucky, Lexington, KY, United States.
Guoqiang YuF. Joseph Halcomb III M.D. Department of Biomedical Engineering, University of Kentucky, Lexington, KY, United States.
Tadahide IzumiDepartment of Toxicology and Cancer Biology, University of Kentucky, Lexington, KY, United States. Electronic address: t.izumi@uky.edu.
University of Kentucky · USMarkey Cancer Center · USUniversity of Cincinnati · USHouston Eye Associates · USNorthwestern University · US

Funding

University of Kentucky Markey Cancer Center Support Grant ECIA SupplementP30CA177558 · NCI · UNIVERSITY OF KENTUCKY · PI Bernard Mark Evers · 2013 to 2026
$38.3M
University of Kentucky Center for Cancer MetabolismP20GM121327 · NIGMS · UNIVERSITY OF KENTUCKY · PI Jianhang Jia · 2017 to 2026
$25.0M
Training Program in Cancer TherapeuticsT32CA117846 · NCI · UNIVERSITY OF CINCINNATI · PI PRICE, CAROLYN M, TAKIAR, VINITA · 2006 to 2022
$6.5M
TRAINING GRANT IN MOLECULAR MECHANISMS OF TOXICITY.T32ES007266 · NIEHS · UNIVERSITY OF KENTUCKY · PI LIU, XIAOQI, MELLON, ISABEL W · 1990 to 2020
$3.7M
Repair of oxidative DNA damage in mammalian cellsR01CA098664 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI IZUMI, TADAHIDE · 2003 to 2013
$2.4M
Diffuse Optical Monitoring of Head and Neck Tumor TherapyR01CA149274 · NCI · UNIVERSITY OF KENTUCKY · PI YU, GUOQIANG · 2010 to 2014
$1.4M
A genomic locus associated with radiation resistance of oral cancer cellsR03CA249111 · NCI · UNIVERSITY OF KENTUCKY · PI IZUMI, TADAHIDE · 2020 to 2021
$153k
Translational Research Career Development: Overcoming Resistance to RadiotherapyIK2BX004360 · VA · CINCINNATI VA MEDICAL CENTER RESEARCH · PI Vinita Takiar · 2019 to 2026
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BLRD VA IK2 BX004360NCI NIH HHS P30 CA177558NCI NIH HHS R01 CA098664NCI NIH HHS R01 CA149274NCI NIH HHS R03 CA249111NCI NIH HHS T32 CA117846NIEHS NIH HHS T32 ES007266NIGMS NIH HHS P20 GM121327
6 · The paper itself

Abstract

objectivesRecurrence rates for head and neck squamous cell carcinoma (HNSCC) approach 50% at 5 years. Current staging fails to identify patients with a worse prognosis who might benefit from intensified treatment, which warrants improved prognostic biomarkers. The purpose of this retrospective case study is to identify potential prognostic biomarkers in patients with HNSCC including APE1 (DNA repair/redox gene regulator), NRF2 and PPARGC1A (redox gene regulators), SOD3 and DCN (antioxidant proteins). MATERIALS AND

methodsDifferential protein expression between benign, carcinoma in situ (CIS), and invasive HNSCC tissue specimens from 77 patients was assessed using immunohistochemistry. Protein expression was analyzed with multivariate, pair-wise, and Kaplan-Meier survival analyses to identify potential prognostic biomarkers. Utilizing The Cancer Genome Atlas's transcriptome database, pair-wise and survival analysis was performed to identify potential prognostic biomarkers.

resultsAPE1, NRF2, PPARGC1A, SOD3, and DCN expression in HNSCC in relation to, lymph node invasion, and patient survival were examined. Elevated APE1 protein expression in CIS corresponded with reduced survival (p = 0.0243). Increased APE1 gene expression in stage T4a HNSCC was associated with reduced patient survival (p < 0.015). Increased PPARGC1A in invasive tumor correlated with reduced survival (p = 0.0281). Patients with lymph node invasion at diagnosis had significantly increased APE1 protein in the primary sites (p < 0.05). Patients with poorly differentiated invasive tumors had reduced PPARGC1A in CIS proximal to the invasive tumor and had elevated DCN and SOD3 in proximal benign tissue (p < 0.05).

conclusionsThe expression of APE1, DCN, and SOD3 is a potential prognostic signature that identifies patients with worsened survival.

Indexed as

AdultAgedBiomarkers, TumorCarcinoma in SituDatabases, GeneticDecorinDNA-(Apurinic or Apyrimidinic Site) LyaseFemaleHead and Neck NeoplasmsHumansImmunohistochemistryKaplan-Meier EstimateLymph NodesMaleMiddle AgedNeoplasm InvasivenessAPEX1 protein, humanBiomarkers, TumorDCN protein, humanDecorinDNA-(Apurinic or Apyrimidinic Site) LyaseNeoplasm ProteinsNFE2L2 protein, humanNF-E2-Related Factor 2Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaPPARGC1A protein, humanSOD3 protein, humanSuperoxide DismutaseBiomarkersCarcinoma in situImmunohistochemistryLymph nodesRetrospective studiesSquamous cell carcinoma of head and neckSurvival analysisTranscriptome

Identifiers

PMID32801084
PMCPMC8256620
OpenAlexW3048561563

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.