Evidence map›Paper›PMID 32799607›Full record

ArticleOphthalmic genetics2020

Simultaneous identification of clinically relevant

Liya Xu, Lishuang Shen, Ashley Polski, Rishvanth K Prabakar, Rachana Shah, Rima Jubran, Jonathan W Kim, Jacklyn Biegel, Peter Kuhn, David Cobrinik and 3 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Ophthalmic genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04959097 (Retinoblastoma Patient Clinical Database and Tissue Repository), which is not on this map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04959097 recruitingnot on this map

Retinoblastoma Patient Clinical Database and Tissue Repository

Typeobservational_patient_registrySponsorChildren's Hospital Los AngelesRan2017 to 2030Enrolled800ConditionsRetinoblastoma, Retinoblastoma Bilateral, Retinoblastoma Unilateral
3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The trends of retinoblastoma research in the past decade.International journal of ophthalmology · 2026
    Article
  5. Article
  6. Observational
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Liya XuThe Vision Center, Children's Hospital Los Angeles , Los Angeles, California, USA.
Lishuang ShenCenter for Personalized Medicine, Department of Pathology and Laboratory Medicine, Children's Hospital Los Angeles , Los Angeles, California, USA.
Ashley PolskiThe Vision Center, Children's Hospital Los Angeles , Los Angeles, California, USA.
Rishvanth K PrabakarDepartment of Molecular and Computational Biology, University of Southern California , Los Angeles, California, USA.
Rachana ShahCenter for Blood Disorders, Children's Hospital Los Angeles , Los Angeles, California, USA.
Rima JubranCenter for Blood Disorders, Children's Hospital Los Angeles , Los Angeles, California, USA.
Jonathan W KimThe Vision Center, Children's Hospital Los Angeles , Los Angeles, California, USA.
Jacklyn BiegelCenter for Personalized Medicine, Department of Pathology and Laboratory Medicine, Children's Hospital Los Angeles , Los Angeles, California, USA.
Peter KuhnDepartment of Biological Sciences, Dornsife College of Letters, Arts, and Sciences, University of Southern California , Los Angeles, California, USA.
David CobrinikThe Vision Center, Children's Hospital Los Angeles , Los Angeles, California, USA.
James HicksDepartment of Biological Sciences, Dornsife College of Letters, Arts, and Sciences, University of Southern California , Los Angeles, California, USA.
Xiaowu GaiCenter for Personalized Medicine, Department of Pathology and Laboratory Medicine, Children's Hospital Los Angeles , Los Angeles, California, USA.
Jesse L BerryThe Vision Center, Children's Hospital Los Angeles , Los Angeles, California, USA.
Children's Hospital of Los Angeles · USUniversity of Southern California · USKeck Hospital of USC · USUSC Norris Comprehensive Cancer Center · US

Funding

USC/NORRIS COMPREHENSIVE CANCER CENTER (CORE) SUPPORTP30CA014089 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Fumito Ito · 1985 to 2026
$181.4M
Ophthalmic Therapeutics Engineering CoreP30EY029220 · NEI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Mahnaz Shahidi · 2018 to 2026
$6.5M
Successive responses to oncogenic aberrations in retinoblastoma genesis.R01CA137124 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI David Cobrinik · 2011 to 2026
$6.3M
Development of a surrogate liquid biopsy from the aqueous humor in retinoblastoma eyes.K08CA232344 · NCI · CHILDREN'S HOSPITAL OF LOS ANGELES · PI BERRY, JESSE L · 2018 to 2022
$1.1M
NCI NIH HHS K08 CA232344NCI NIH HHS P30 CA014089NCI NIH HHS R01 CA137124NEI NIH HHS P30 EY029220
6 · The paper itself

Abstract

backgroundDetection of germline MATERIALS AND

methodsSubjects included 7 eyes of 6 RB patients that underwent AH extraction, and 4 matched tumor samples. Cell-free DNA (cfDNA) was isolated and sequenced to assess genome-wide SCNAs. The same sequencing libraries then underwent targeted resequencing and mutation detection using a custom hybridization panel that targets

resultsFour of 7 AH samples contained clinically significant SCNAs. Of the 3 other samples, 1 showed focal

conclusionsAH liquid biopsy is a minimally invasive,

Indexed as

DNA Copy Number VariationsGenetic MarkersMutationAqueous HumorDNA Mutational AnalysisHumansRetinal NeoplasmsRetinoblastomaRetinoblastoma Binding ProteinsUbiquitin-Protein LigasesGenetic MarkersRB1 protein, humanRetinoblastoma Binding ProteinsUbiquitin-Protein LigasesAqueous humormutational analysisRB1 generetinoblastomasomatic copy number alterations

Identifiers

PMID32799607
PMCPMC7806277
OpenAlexW3049324470

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.