Evidence map›Paper›PMID 32798611›Full record

ArticleRegulatory toxicology and pharmacology : RTP2020

Selecting a minimal set of androgen receptor assays for screening chemicals.

Richard Judson, Keith Houck, Katie Paul Friedman, Jason Brown, Patience Browne, Paul A Johnston, David A Close, Kamel Mansouri, Nicole Kleinstreuer

Open access · hybridAbstract read
In one paragraph

Article in Regulatory toxicology and pharmacology : RTP, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Weight of evidence for cross-species conservation of androgen receptor-based biological activity.Toxicological sciences : an official journal of the Society of Toxicology · 2023
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Richard JudsonU.S. Environmental Protection Agency, RTP, NC, USA. Electronic address: judson.richard@epa.gov.
Keith HouckU.S. Environmental Protection Agency, RTP, NC, USA.
Katie Paul FriedmanU.S. Environmental Protection Agency, RTP, NC, USA.
Jason BrownU.S. Environmental Protection Agency, RTP, NC, USA.
Patience BrowneOECD, Paris, France.
Paul A JohnstonDepartment of Pharmaceutical Sciences, School of Pharmacy, University of Pittsburgh, Pittsburgh, PA, USA.
David A CloseDepartment of Pharmaceutical Sciences, School of Pharmacy, University of Pittsburgh, Pittsburgh, PA, USA.
Kamel MansouriIntegrated Laboratory Systems, Inc., Morrisville, NC, USA.
Nicole KleinstreuerNTP Interagency Center for the Evaluation of Alternative Toxicological Methods, RTP, NC, USA.
Environmental Protection Agency · USUniversity of Pittsburgh · USIntegrated Laboratory Systems, Inc. · USOrganisation de Coopération et de Développement Economiques · FR

Funding

Intramural EPA EPA999999
6 · The paper itself

Abstract

Screening certain environmental chemicals for their ability to interact with endocrine targets, including the androgen receptor (AR), is an important global concern. We previously developed a model using a battery of eleven in vitro AR assays to predict in vivo AR activity. Here we describe a revised mathematical modeling approach that also incorporates data from newly available assays and demonstrate that subsets of assays can provide close to the same level of predictivity. These subset models are evaluated against the full model using 1820 chemicals, as well as in vitro and in vivo reference chemicals from the literature. Agonist batteries of as few as six assays and antagonist batteries of as few as five assays can yield balanced accuracies of 95% or better relative to the full model. Balanced accuracy for predicting reference chemicals is 100%. An approach is outlined for researchers to develop their own subset batteries to accurately detect AR activity using assays that map to the pathway of key molecular and cellular events involved in chemical-mediated AR activation and transcriptional activity. This work indicates in vitro bioactivity and in silico predictions that map to the AR pathway could be used in an integrated approach to testing and assessment for identifying chemicals that interact directly with the mammalian AR.

Indexed as

Models, TheoreticalReceptors, AndrogenAndrogen Receptor AntagonistsAndrogensAnimalsEnvironmental ExposureHazardous SubstancesHigh-Throughput Screening AssaysHumansAndrogen Receptor AntagonistsAndrogensHazardous SubstancesReceptors, AndrogenAlternative testing methodsAndrogen receptorEndocrine disruptionIn vitro

Identifiers

PMID32798611
PMCPMC8356084
OpenAlexW3049768689

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.