Evidence map›Paper›PMID 32796911›Full record

ArticleCommunications biology2020

An essential role of acetyl coenzyme A in the catalytic cycle of insect arylalkylamine N-acetyltransferase.

Chu-Ya Wu, I-Chen Hu, Yi-Chen Yang, Wei-Cheng Ding, Chih-Hsuan Lai, Yi-Zong Lee, Yi-Chung Liu, Hui-Chun Cheng, Ping-Chiang Lyu

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Chu-Ya Wu *Institute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, 30013, Taiwan.ORCID http://orcid.org/0000-0002-3182-5246
I-Chen Hu *Institute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, 30013, Taiwan.ORCID http://orcid.org/0000-0001-9968-5609
Yi-Chen YangInstitute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Wei-Cheng DingInstitute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, 30013, Taiwan.ORCID http://orcid.org/0000-0001-6091-3950
Chih-Hsuan LaiInstitute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Yi-Zong LeeInstitute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Yi-Chung LiuInstitute of Population Sciences, National Health Research Institutes, Zhunan, 35053, Taiwan.ORCID http://orcid.org/0000-0003-1437-0363
Hui-Chun ChengInstitute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Ping-Chiang LyuInstitute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, 30013, Taiwan. pclyu@mx.nthu.edu.tw.ORCID http://orcid.org/0000-0002-6824-543X
National Tsing Hua University · TWNational Health Research Institutes · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acetyl coenzyme A (Ac-CoA)-dependent N-acetylation is performed by arylalkylamine N-acetyltransferase (AANAT) and is important in many biofunctions. AANAT catalyzes N-acetylation through an ordered sequential mechanism in which cofactor (Ac-CoA) binds first, with substrate binding afterward. No ternary structure containing AANAT, cofactor, and substrate was determined, meaning the details of substrate binding and product release remain unclear. Here, two ternary complexes of dopamine N-acetyltransferase (Dat) before and after N-acetylation were solved at 1.28 Å and 1.36 Å resolution, respectively. Combined with the structures of Dat in apo form and Ac-CoA bound form, we addressed each stage in the catalytic cycle. Isothermal titration calorimetry (ITC), crystallography, and nuclear magnetic resonance spectroscopy (NMR) were utilized to analyze the product release. Our data revealed that Ac-CoA regulates the conformational properties of Dat to form the catalytic site and substrate binding pocket, while the release of products is facilitated by the binding of new Ac-CoA.

Indexed as

BiocatalysisAcetylationAcetyl Coenzyme AAnimalsArylalkylamine N-AcetyltransferaseBiogenic MonoaminesCatalytic DomainInsectaModels, MolecularProtein ConformationStructure-Activity RelationshipSubstrate SpecificityAcetyl Coenzyme AArylalkylamine N-AcetyltransferaseBiogenic Monoamines

Identifiers

PMID32796911
PMCPMC7427786
OpenAlexW3049368489

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.