Evidence map›Paper›PMID 32795448›Full record

ArticleCurrent biology : CB2020

Identification of the First Oomycete Mating-type Locus Sequence in the Grapevine Downy Mildew Pathogen, Plasmopara viticola.

Yann Dussert, Ludovic Legrand, Isabelle D Mazet, Carole Couture, Marie-Christine Piron, Rémy-Félix Serre, Olivier Bouchez, Pere Mestre, Silvia Laura Toffolatti, Tatiana Giraud and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
5.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
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  9. Origin and pathogenicity variation ofFrontiers in microbiology · 2024
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  12. Pathogen Adaptation to American (Plants (Basel, Switzerland) · 2022
    Article
  13. Diploid-dominant life cycles characterize the early evolution of Fungi.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  14. Article
  15. Review
  16. Review
  17. SMARTdenovo: aGigaByte (Hong Kong, China) · 2021
    Article
  18. The Study of the Germination Dynamics ofFrontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Yann DussertSAVE, INRAE, Bordeaux Sciences Agro, Université de Bordeaux, F-33140 Villenave d'Ornon, France. Electronic address: dussert.yann@gmail.com.
Ludovic LegrandLIPM, INRAE, Université de Toulouse, CNRS, Castanet-Tolosan, France.
Isabelle D MazetSAVE, INRAE, Bordeaux Sciences Agro, Université de Bordeaux, F-33140 Villenave d'Ornon, France.
Carole CoutureSAVE, INRAE, Bordeaux Sciences Agro, Université de Bordeaux, F-33140 Villenave d'Ornon, France.
Marie-Christine PironSVQV, INRAE, Université de Strasbourg, F-68000 Colmar, France.
Rémy-Félix SerreINRAE, US 1426 GeT-PlaGe, Genotoul, Castanet-Tolosan, France.
Olivier BouchezINRAE, US 1426 GeT-PlaGe, Genotoul, Castanet-Tolosan, France.
Pere MestreSVQV, INRAE, Université de Strasbourg, F-68000 Colmar, France.
Silvia Laura ToffolattiDipartimento di Scienze Agrarie e Ambientali, Università degli Studi di Milano, Milano, Italy.
Tatiana GiraudEcologie Systematique et Evolution, CNRS, AgroParisTech, Universite Paris-Saclay, 91400 Orsay, France.
François DelmotteSAVE, INRAE, Bordeaux Sciences Agro, Université de Bordeaux, F-33140 Villenave d'Ornon, France. Electronic address: francois.delmotte@inrae.fr.
Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRUniversité de Bordeaux · FRCentre National de la Recherche Scientifique · FRUniversity of Milan · IT

Funding

European Research Council 832352
6 · The paper itself

Abstract

Mating types are self-incompatibility systems that promote outcrossing in plants, fungi, and oomycetes. Mating-type genes have been widely studied in plants and fungi but have yet to be identified in oomycetes, eukaryotic organisms closely related to brown algae that cause many destructive animal and plant diseases. We identified the mating-type locus of Plasmopara viticola, the oomycete responsible for grapevine downy mildew, one of the most damaging grapevine diseases worldwide. Using a genome-wide association approach, we identified a 570-kb repeat-rich non-recombining region controlling mating types, with two highly divergent alleles. We showed that one mating type was homozygous, whereas the other was heterozygous at this locus. The mating-type locus encompassed 40 genes, including one encoding a putative hormone receptor. Functional studies will, however, be required to validate the function of these genes and find the actual determinants of mating type. Our findings have fundamental implications for our understanding of the evolution of mating types, as they reveal a unique determinism involving an asymmetry of heterozygosity, as in sex chromosomes and unlike other mating-type systems. This identification of the mating-type locus in such an economically important crop pathogen also has applied implications, as outcrossing facilitates rapid evolution and resistance to harsh environmental conditions.

Indexed as

Genome, ProtozoanGenome-Wide Association StudyOomycetesPhenotypeReproductionSex DifferentiationTranscription FactorsVitisTranscription Factorsmating-typeoomycetesself-incompatibility systemstramenopiles

Identifiers

PMID32795448
PMCPMC7116238
OpenAlexW3048487707

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.