Evidence map›Paper›PMID 32794657›Full record

ArticleMolecular genetics & genomic medicine2020

Analysis of rare variants of autosomal-dominant genes in a Chinese population with sporadic Parkinson's disease.

Ran Zheng, Chong-Yao Jin, Ying Chen, Yang Ruan, Ting Gao, Zhi-Hao Lin, Jia-Xian Dong, Ya-Ping Yan, Jun Tian, Jia-Li Pu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  5. Article
  6. α-Synuclein V15A Variant in Familial Parkinson's Disease Exhibits a Weaker Lipid-Binding Property.Movement disorders : official journal of the Movement Disorder Society · 2022
    Article
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  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Ran ZhengDepartment of Neurology, College of Medicine, Second Affiliated Hospital, Zhejiang University, Hangzhou, Zhejiang, China.
Chong-Yao JinDepartment of Neurology, College of Medicine, Second Affiliated Hospital, Zhejiang University, Hangzhou, Zhejiang, China.
Ying ChenDepartment of Neurology, College of Medicine, Second Affiliated Hospital, Zhejiang University, Hangzhou, Zhejiang, China.
Yang RuanDepartment of Neurology, College of Medicine, Second Affiliated Hospital, Zhejiang University, Hangzhou, Zhejiang, China.
Ting GaoDepartment of Neurology, College of Medicine, Second Affiliated Hospital, Zhejiang University, Hangzhou, Zhejiang, China.
Zhi-Hao LinDepartment of Neurology, College of Medicine, Second Affiliated Hospital, Zhejiang University, Hangzhou, Zhejiang, China.
Jia-Xian DongDepartment of Neurology, College of Medicine, Second Affiliated Hospital, Zhejiang University, Hangzhou, Zhejiang, China.
Ya-Ping YanDepartment of Neurology, College of Medicine, Second Affiliated Hospital, Zhejiang University, Hangzhou, Zhejiang, China.
Jun TianDepartment of Neurology, College of Medicine, Second Affiliated Hospital, Zhejiang University, Hangzhou, Zhejiang, China.
Jia-Li PuDepartment of Neurology, College of Medicine, Second Affiliated Hospital, Zhejiang University, Hangzhou, Zhejiang, China.
Bao-Rong ZhangDepartment of Neurology, College of Medicine, Second Affiliated Hospital, Zhejiang University, Hangzhou, Zhejiang, China.ORCID 0000-0002-8099-7407
Second Affiliated Hospital of Zhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTo date, several studies have suggested that genes involved in monogenic forms of Parkinson's disease (PD) contribute to unrelated sporadic cases, but there is limited evidence in the Chinese population.

methodsWe performed a systematic analysis of 12 autosomal-dominant PD (AD-PD) genes (SNCA, LRRK2, GIGYF2, VPS35, EIF4G1, DNAJC13, CHCHD2, HTRA2, NR4A2, RIC3, TMEM230, and UCHL1) using panel sequencing and database filtration in a case-control study of a cohort of 391 Chinese sporadic PD patients and unrelated controls. We evaluated the association between candidate variants and sporadic PD using gene-based analysis.

resultsOverall, 18 rare variants were discovered in 18.8% (36/191) of the index patients. In addition to previously reported pathogenic mutations (LRRK2 p.Arg1441His and p.Ala419Val), another four unknown variants were found in LRRK2, which also contribute to PD risk (p = 0.002; odds ratio (OR) = 7.83, 95% confidence intervals (CI) = 1.76-34.93). The cumulative frequency of undetermined rare variants was significantly higher in PD patients (14.1%) than in controls (3.5%) (p = 0.0002; OR=4.54, 95% CI = 1.93-10.69).

conclusionOur results confirm the strong impact of LRRK2 on the risk of sporadic PD, and also provide considerable evidence of the existence of additional undetermined rare variants in AD-PD genes that contribute to the genetic etiology of sporadic PD in a Chinese cohort.

Indexed as

Genetic LociPolymorphism, Single NucleotideAdultAgedChinaFemaleGenes, DominantHumansLeucine-Rich Repeat Serine-Threonine Protein Kinase-2MaleMiddle AgedMutation, MissenseParkinson DiseaseProtein DomainsLeucine-Rich Repeat Serine-Threonine Protein Kinase-2LRRK2 protein, humanautosomal-dominant genesgene-based analysisParkinson's diseaserare variantssporadic

Identifiers

PMID32794657
PMCPMC7549569
OpenAlexW3049371734

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.