Evidence map›Paper›PMID 32793329›Full record

ArticleAoB PLANTS2020

Direct fluorescence imaging of lignocellulosic and suberized cell walls in roots and stems.

Peter Kitin, Satoshi Nakaba, Christopher G Hunt, Sierin Lim, Ryo Funada

Open access · goldAbstract read
In one paragraph

Article in AoB PLANTS, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 68 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Peter KitinSchool of Environmental and Forest Sciences, University of Washington, Seattle, WA, USA.
Satoshi NakabaInstitute of Global Innovation Research, Tokyo University of Agriculture and Technology, Fuchu-Tokyo, Japan.
Christopher G HuntUSDA Forest Products Laboratory, Madison, WI, USA.
Sierin LimSchool of Chemical and Biomedical Engineering, Nanyang Technological University, Singapore, Singapore.
Ryo FunadaInstitute of Global Innovation Research, Tokyo University of Agriculture and Technology, Fuchu-Tokyo, Japan.
Tokyo University of Agriculture and Technology · JPForest Products Laboratory · USNanyang Technological University · SGUniversity of Washington · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Investigating plant structure is fundamental in botanical science and provides crucial knowledge for the theories of plant evolution, ecophysiology and for the biotechnological practices. Modern plant anatomy often targets the formation, localization and characterization of cellulosic, lignified or suberized cell walls. While classical methods developed in the 1960s are still popular, recent innovations in tissue preparation, fluorescence staining and microscopy equipment offer advantages to the traditional practices for investigation of the complex lignocellulosic walls. Our goal is to enhance the productivity and quality of microscopy work by focusing on quick and cost-effective preparation of thick sections or plant specimen surfaces and efficient use of direct fluorescent stains. We discuss popular histochemical microscopy techniques for visualization of cell walls, such as autofluorescence or staining with calcofluor, Congo red (CR), fluorol yellow (FY) and safranin, and provide detailed descriptions of our own approaches and protocols. Autofluorescence of lignin in combination with CR and FY staining can clearly differentiate between lignified, suberized and unlignified cell walls in root and stem tissues. Glycerol can serve as an effective clearing medium as well as the carrier of FY for staining of suberin and lipids allowing for observation of thick histological preparations. Three-dimensional (3D) imaging of all cell types together with chemical information by wide-field fluorescence or confocal laser scanning microscopy (CLSM) was achieved.

Indexed as

3D imagingautofluorescencecellulosic wallCongo redfluorol yellowglycerol clearinghistochemistryligninlipidssuberin

Identifiers

PMID32793329
PMCPMC7415075
OpenAlexW3038428051

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.