Evidence map›Paper›PMID 32792643›Full record

ArticleScientific reports2020

Native American ancestry significantly contributes to neuromyelitis optica susceptibility in the admixed Mexican population.

Sandra Romero-Hidalgo, José Flores-Rivera, Verónica Rivas-Alonso, Rodrigo Barquera, María Teresa Villarreal-Molina, Bárbara Antuna-Puente, Luis Rodrigo Macias-Kauffer, Marisela Villalobos-Comparán, Jair Ortiz-Maldonado, Neng Yu and 23 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. [Classic presentation of neuromyelitis optica: clinical case and review of the literature].Revista medica del Instituto Mexicano del Seguro Social · 2024
    Review
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  17. Interaction of HLA Class II rs9272219 andFrontiers in genetics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 13 institutions in 9 countries.

Sandra Romero-Hidalgo *Departamento de Genómica Computacional, Instituto Nacional de Medicina Genómica (INMEGEN), 14610, Mexico City, Mexico. sromero@inmegen.gob.mx.
José Flores-Rivera *Laboratorio Clínico de Enfermedades Neurodegenerativas, Instituto Nacional de Neurología y Neurocirugía "Manuel Velasco Suarez" (INNN), 14269, Mexico City, Mexico.
Verónica Rivas-AlonsoLaboratorio Clínico de Enfermedades Neurodegenerativas, Instituto Nacional de Neurología y Neurocirugía "Manuel Velasco Suarez" (INNN), 14269, Mexico City, Mexico.
Rodrigo BarqueraMolecular Genetics Laboratory, National School of Anthropology and History, 14030, Mexico City, Mexico.
María Teresa Villarreal-MolinaLaboratorio de Enfermedades Cardiovasculares, INMEGEN, 14610, Mexico City, Mexico.
Bárbara Antuna-PuenteLaboratorio de Enfermedades Cardiovasculares, INMEGEN, 14610, Mexico City, Mexico.
Luis Rodrigo Macias-KaufferUnidad de Genómica de Poblaciones Aplicada a La Salud, Facultad de Química, UNAM/INMEGEN, 04510, Mexico City, Mexico.
Marisela Villalobos-ComparánDepartamento de Genómica Computacional, Instituto Nacional de Medicina Genómica (INMEGEN), 14610, Mexico City, Mexico.
Jair Ortiz-MaldonadoLaboratorio Clínico de Enfermedades Neurodegenerativas, Instituto Nacional de Neurología y Neurocirugía "Manuel Velasco Suarez" (INNN), 14269, Mexico City, Mexico.
Neng YuHLA Laboratory, The American Red Cross Northeast Division, Dedham, MA, 02026, USA.
Tatiana V LebedevaHLA Laboratory, The American Red Cross Northeast Division, Dedham, MA, 02026, USA.
Sharon M AloscoHLA Laboratory, The American Red Cross Northeast Division, Dedham, MA, 02026, USA.
Juan Daniel García-RodríguezDepartamento de Genómica Computacional, Instituto Nacional de Medicina Genómica (INMEGEN), 14610, Mexico City, Mexico.
Carolina González-TorresUnidad de Secuenciación e Identificación de Polimorfismos, INMEGEN, 14610, Mexico City, Mexico.
Sandra Rosas-MadrigalLaboratorio de Enfermedades Cardiovasculares, INMEGEN, 14610, Mexico City, Mexico.
Graciela OrdoñezNeuroimmunology, INNN, Mexico City, Mexico.
Jorge Luis Guerrero-CamachoNeurogenetics Department, INNN, 14269, Mexico City, Mexico.
Irene Treviño-FrenkDepartment of Neurology, Instituto Nacional de Ciencias Medicas y Nutrición "Salvador Zubirán" (INCMNSZ), 14080, Mexico City, Mexico.
Monica Escamilla-TilchDepartment of Transplantation, INCMNSZ, 14080, Mexico City, Mexico.
Maricela García-LechugaDepartment of Transplantation, INCMNSZ, 14080, Mexico City, Mexico.
Víctor Hugo Tovar-MéndezDepartment of Transplantation, INCMNSZ, 14080, Mexico City, Mexico.
Hanna Pacheco-UbaldoMolecular Genetics Laboratory, National School of Anthropology and History, 14030, Mexico City, Mexico.
Victor Acuña-AlonzoMolecular Genetics Laboratory, National School of Anthropology and History, 14030, Mexico City, Mexico.
Maria-Cátira BortoliniDepartamento de Genética, Universidade Federal Do Rio Grande Do Sul, Porto Alegre, 91501-970, Brasil.
Carla GalloLaboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima 31, Peru.
Gabriel BedoyaGENMOL (Genetica Molecular), Universidad de Antioquia, 5001000, Medellin, Colombia.
Francisco RothhammerDepartamento de Tecnología Médica, Facultad de Ciencias de La Salud, Universidad de Tarapaca, 1000009, Arica, Chile.
Rolando González-JoseCentro Nacional Patagónico, CONICET, Unidad de Diversidad, Sistematica Y Evolucion, Puerto Madryn U912OACD, Argentina.
Andrés Ruiz-LinaresDepartment of Genetics, Evolution and Environment, UCL Genetics Institute, University College London, London, WC1E 6BT, UK.
Samuel Canizales-QuinterosUnidad de Genómica de Poblaciones Aplicada a La Salud, Facultad de Química, UNAM/INMEGEN, 04510, Mexico City, Mexico.
Edmond YunisDepartment of Cancer Immunology and Virology, Dana Farber Cancer Institute, Boston, MA, 02215, USA.
Julio GranadosDepartment of Transplantation, INCMNSZ, 14080, Mexico City, Mexico. julgrate@yahoo.com.
Teresa CoronaLaboratorio Clínico de Enfermedades Neurodegenerativas, Instituto Nacional de Neurología y Neurocirugía "Manuel Velasco Suarez" (INNN), 14269, Mexico City, Mexico. coronav@unam.mx.
National Institute of Genomic Medicine · MXInstituto Nacional de Neurología y Neurocirugía · MXInstituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán · MXAmerican Red Cross · USCentro Científico Tecnológico Patagónico · ARCentro Médico ABC · MXDana-Farber Cancer Institute · USMax Planck Institute for the Science of Human History · DEUniversidad de Antioquia · COUniversidade Federal do Rio Grande do Sul · BRUniversidad Peruana Cayetano Heredia · PEUniversity College London · GBUniversity of Tarapacá · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neuromyelitis Optica (NMO) is an autoimmune disease with a higher prevalence in non-European populations. Because the Mexican population resulted from the admixture between mainly Native American and European populations, we used genome-wide microarray, HLA high-resolution typing and AQP4 gene sequencing data to analyze genetic ancestry and to seek genetic variants conferring NMO susceptibility in admixed Mexican patients. A total of 164 Mexican NMO patients and 1,208 controls were included. On average, NMO patients had a higher proportion of Native American ancestry than controls (68.1% vs 58.6%; p = 5 × 10

Indexed as

Genetic Predisposition to DiseaseAmerican Indian or Alaska NativeAquaporin 4Case-Control StudiesFemaleGene FrequencyHLA AntigensHumansMaleMexicoNeuromyelitis OpticaAQP4 protein, humanAquaporin 4HLA Antigens

Identifiers

PMID32792643
PMCPMC7426416
OpenAlexW3048465699

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.