Evidence map›Paper›PMID 32792514›Full record

ArticleScientific reports2020

Induction of mitochondria-mediated apoptosis and suppression of tumor growth in zebrafish xenograft model by cyclic dipeptides identified from Exiguobacterium acetylicum.

Sekar Jinendiran, Weilin Teng, Hans-Uwe Dahms, Wangta Liu, Vinoth Kumar Ponnusamy, Charles Chien-Chih Chiu, B S Dileep Kumar, Natesan Sivakumar

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
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  3. Review
  4. Review
  5. Chemical profiling and cytotoxic activity of the endophytic fungus Epicoccum sorghinum isolated from Disynaphia filifolia.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
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  13. Pigmented Microbial Extract (PMB) fromInternational journal of molecular sciences · 2023
    Article
  14. Article
  15. Undescribed Metabolites from an ActinobacteriaMolecules (Basel, Switzerland) · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Sekar JinendiranDepartment of Molecular Microbiology, School of Biotechnology, Madurai Kamaraj University, Madurai, 625021, India.
Weilin TengDepartment of Biotechnology, Kaohsiung Medical University, Kaohsiung, 80708, Taiwan.
Hans-Uwe DahmsDepartment of Biomedical Science and Environmental Biology, Kaohsiung Medical University, Kaohsiung, 80708, Taiwan. hansd@kmu.edu.tw.
Wangta LiuDepartment of Biotechnology, Kaohsiung Medical University, Kaohsiung, 80708, Taiwan.
Vinoth Kumar PonnusamyDepartment of Medicinal Applied Chemistry, Kaohsiung Medical University, Kaohsiung, 80708, Taiwan.
Charles Chien-Chih ChiuDepartment of Biotechnology, Kaohsiung Medical University, Kaohsiung, 80708, Taiwan.
B S Dileep KumarAgro-Processing and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram, 695019, India. kumardileep@niist.res.in.
Natesan SivakumarDepartment of Molecular Microbiology, School of Biotechnology, Madurai Kamaraj University, Madurai, 625021, India. sivamku.ac@gmail.com.
Kaohsiung Medical University · TWMadurai Kamaraj University · INNational Institute for Interdisciplinary Science and Technology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colorectal cancer is the most common type of gastrointestinal cancers with poor survival and limited therapeutic options. In this study, four structurally different cyclic dipeptides (or diketopiperazine) were isolated and identified as cyclo (L-Pro-L-Leu), cyclo (L-Pro-L-Val), cyclo (L-Pro-L-Phe) and cyclo (L-Pro-L-Tyr) from the ethyl acetate extract in the cell-free filtrate of Exiguobacterium acetylicum S01. The anticancer potential of identified DKPs on colorectal cancer HT-29 cells in vitro and in vivo zebrafish xenograft model was evaluated. The MTT (3-(4, 5-dimethylthiazol-2yl)-2, 5-diphenyltetrazolium bromide)) assay showed that four DKPs exhibited significant inhibition of HT-29 cells viability in a dose-dependent manner whereas there were no cytotoxic effects on normal mouse fibroblast 3T3 cells. Also, we observed that all DKPs induce early and late apoptotic cell death in HT-29 cells. Moreover, the expression levels of apoptotic (cytochrome-c, caspase-3 and Bid) and anti-apoptotic (Bcl-2) markers were up- and down-regulated in HT-29 cells in response to DKPs treatments. Furthermore, these four DKPs remarkably inhibited the tumor progression in a zebrafish xenograft model within a nonlethal dose range. Overall, our findings suggest that cyclic dipeptides derived from E. acetylicum S01 could be promising chemopreventive/ therapeutic candidates against cancer.

Indexed as

ApoptosisAnimalsCell ProliferationColorectal NeoplasmsDipeptidesExiguobacteriumHumansMitochondriaPeptides, CyclicTumor Cells, CulturedXenograft Model Antitumor AssaysZebrafishDipeptidesPeptides, Cyclic

Identifiers

PMID32792514
PMCPMC7426938
OpenAlexW3048503699

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.