Evidence map›Paper›PMID 32790900›Full record

ArticleChemMedChem2020

Stability and Cell Permeability of Sulfonyl Fluorides in the Design of Lys-Covalent Antagonists of Protein-Protein Interactions.

Luca Gambini, Parima Udompholkul, Ahmed F Salem, Carlo Baggio, Maurizio Pellecchia

Open access · greenAbstract read
In one paragraph

Article in ChemMedChem, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  5. Review
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  9. Review
  10. Peptide-based covalent inhibitors of protein-protein interactions.Journal of peptide science : an official publication of the European Peptide Society · 2023
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Luca GambiniBiomedical sciences Division, School of Medicine, University of California, Riverside, 900 University Avenue, CA, 92521, Riverside, USA.
Parima UdompholkulBiomedical sciences Division, School of Medicine, University of California, Riverside, 900 University Avenue, CA, 92521, Riverside, USA.
Ahmed F SalemBiomedical sciences Division, School of Medicine, University of California, Riverside, 900 University Avenue, CA, 92521, Riverside, USA.
Carlo BaggioBiomedical sciences Division, School of Medicine, University of California, Riverside, 900 University Avenue, CA, 92521, Riverside, USA.
Maurizio PellecchiaBiomedical sciences Division, School of Medicine, University of California, Riverside, 900 University Avenue, CA, 92521, Riverside, USA.ORCID 0000-0001-5179-470X
University of California, Riverside · US

Funding

Mcl-1 in apoptosis and signal transduction: a structure/function approachR01CA168517 · NCI · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI PELLECCHIA, MAURIZIO · 2012 to 2024
$4.7M
Targeting the EPhA4 in motor neuron disease: a structure-based approachR01NS107479 · NINDS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Maurizio Pellecchia · 2018 to 2026
$3.9M
2/2 Drug Development and Capacity Building: A UCR/CoH-CCC Partnership (Pilot Project 2)P20CA242620 · NCI · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI MARTINEZ, ERNEST, SEEWALDT, VICTORIA L. · 2019 to 2022
$1.2M
NCI NIH HHS P20 CA242620NCI NIH HHS R01 CA168517NINDS NIH HHS R01 NS107479
6 · The paper itself

Abstract

Recently we reported on aryl-fluorosulfates as possible stable and effective electrophiles for the design of lysine covalent, cell permeable antagonists of protein-protein interactions (PPIs). Here we revisit the use of aryl-sulfonyl fluorides as Lys-targeting moieties, incorporating these electrophiles in XIAP (X-linked inhibitor of apoptosis protein) targeting agents. We evaluated stability in buffer and reactivity with Lys311 of XIAP of various aryl-sulfonyl fluorides using biochemical and biophysical approaches, including displacement assays, mass spectrometry, SDS gel electrophoresis, and denaturation thermal shift measurements. To assess whether these modified electrophilic "warheads" can also react with Tyr, we repeated these evaluations with a Lys311Tyr XIAP mutant. Using a direct cellular assay, we could demonstrate that selected agents are cell permeable and interact covalently with their intended target in cell. These results suggest that certain substituted aryl-sulfonyl fluorides can be useful Lys- or Tyr-targeting electrophiles for the design of covalent pharmacological tools or even future therapeutics targeting protein-protein interactions.

Indexed as

Drug DesignHEK293 CellsHumansLysineMolecular StructurePermeabilityProtein BindingSulfinic AcidsX-Linked Inhibitor of Apoptosis ProteinLysineSulfinic Acidssulfuryl fluorideXIAP protein, humanX-Linked Inhibitor of Apoptosis Proteincovalent drugsLys-covalentPPIs.protein-protein interactionssulfonyl fluoridesTyr-covalent

Identifiers

PMID32790900
PMCPMC7722097
OpenAlexW3048548871

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.