Evidence map›Paper›PMID 32790129›Full record

ArticleCytometry. Part A : the journal of the International Society for Analytical Cytology2020

Evaluation of Caspase-3 Activity During Apoptosis with Fluorescence Lifetime-Based Cytometry Measurements and Phasor Analyses.

Kapil Nichani, Jianzhi Li, Miho Suzuki, Jessica P Houston

Open access · hybridAbstract read
In one paragraph

Article in Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
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  6. In Vitro and In Silico Cytotoxic Activity of Isocordoin fromInternational journal of molecular sciences · 2025
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  13. Characterization ofMolecules (Basel, Switzerland) · 2023
    Article
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Kapil NichaniDepartment of Chemical & Materials Engineering, New Mexico State University, Las Cruces, New Mexico, USA.
Jianzhi LiDepartment of Chemical & Materials Engineering, New Mexico State University, Las Cruces, New Mexico, USA.
Miho SuzukiDepartment of Functional Materials and Science, Graduate School of Science and Engineering, Saitama University, Saitama, 338-8570, Japan.
Jessica P HoustonDepartment of Chemical & Materials Engineering, New Mexico State University, Las Cruces, New Mexico, USA.ORCID 0000-0001-8201-6396
New Mexico State University · USSaitama University · JP

Funding

Microflow time-resolved cytometry for FRET and fluorescent protein developmentR01GM129859 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI HOUSTON, JESSICA PEREA · 2018 to 2021
$1.3M
NIGMS NIH HHS R01 GM129859
6 · The paper itself

Abstract

Caspase-3 is a well-described protease with many roles that impact the fate of a cell. During apoptosis, caspase-3 acts as an executioner caspase with important proteolytic functions that lead to the final stages of programmed cell death. Owing to this key role, caspase-3 is exploited intracellularly as a target of control of apoptosis for therapeutic outcomes. Yet the activation of caspase-3 during apoptosis is challenged by other roles and functions (e.g., paracrine signaling). This brief report presents a way to track caspase-3 levels using a flow cytometer that measures excited state fluorescence lifetimes and a signal processing approach that leads to a graphical phasor-based interpretation. An established Förster resonance energy transfer (FRET) bioprobe was used for this test; the connected donor and acceptor fluorophore is cleavable by caspase-3 during apoptosis induction. With the cell-by-cell decay kinetic data and phasor analyses we generate a caspase activation trajectory, which is used to interpret activation throughout apoptosis. When lifetime-based cytometry is combined with a FRET bioprobe and phasor analyses, enzyme activation can be simplified and quantified with phase and modulation data. We envision extrapolating this approach to high content screening, and reinforce the power of phasor approaches with cytometric data. Analyses such as these can be used to cluster cells by their phase and modulation "lifetime fingerprint" when the intracellular fluorescent probe is utilized as a sensor of enzyme activity. © 2020 The Authors. Cytometry Part A published by Wiley Periodicals LLC on behalf of International Society for Advancement of Cytometry.

Indexed as

Fluorescence Resonance Energy TransferFluorescent DyesApoptosisCaspase 3HumansMicroscopy, FluorescenceCaspase 3Fluorescent Dyesapoptosiscaspase-3fluorescence lifetimeFRETphasor analysisproteasetime-resolved flow cytometry

Identifiers

PMID32790129
PMCPMC7738394
OpenAlexW3049452231

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.