Evidence map›Paper›PMID 32788629›Full record

ArticleScientific reports2020

Identification and the potential involvement of miRNAs in the regulation of artemisinin biosynthesis in A. annua.

Shazia Khan, Athar Ali, Monica Saifi, Parul Saxena, Seema Ahlawat, Malik Zainul Abdin

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

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  9. MicroRNAs in Medicinal Plants.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Shazia KhanDepartment of Biotechnology, School of Chemical and Life Sciences, Centre for Transgenic Plant Development, Jamia Hamdard, New Delhi, 110062, India.
Athar AliDepartment of Biotechnology, School of Chemical and Life Sciences, Centre for Transgenic Plant Development, Jamia Hamdard, New Delhi, 110062, India.
Monica SaifiDepartment of Biotechnology, School of Chemical and Life Sciences, Centre for Transgenic Plant Development, Jamia Hamdard, New Delhi, 110062, India.
Parul SaxenaDepartment of Biotechnology, School of Chemical and Life Sciences, Centre for Transgenic Plant Development, Jamia Hamdard, New Delhi, 110062, India.
Seema AhlawatDepartment of Biotechnology, School of Chemical and Life Sciences, Centre for Transgenic Plant Development, Jamia Hamdard, New Delhi, 110062, India.
Malik Zainul AbdinDepartment of Biotechnology, School of Chemical and Life Sciences, Centre for Transgenic Plant Development, Jamia Hamdard, New Delhi, 110062, India. mzabdin@jamiahamdard.ac.in.
Department of Biotechnology · INJamia Hamdard · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Micro RNAs (miRNAs) play crucial regulatory roles in multiple biological processes. Recently they have garnered the attention for their strong influence on the secondary metabolite production in plants. Their role in the regulation of artemisinin (ART) biosynthesis is, however, not fully elucidated. ART is a potent anti-malarial compound recommended by WHO for the treatment of drug-resistant malaria. It is produced by Artemisia annua (A. annua). The lower in planta content of ART necessitates a deep understanding of regulatory mechanisms involved in the biosynthesis of this metabolite. In this study, using modern high throughput small RNA-sequencing by Illumina Nextseq 500 platform for identification and stem-loop RT PCR for validation, miRNAs were identified in the leaf sample of A. annua plant. Here, we report a total of 121 miRNAs from A. annua that target several important genes and transcription factors involved in the biosynthesis of ART. This study revealed the presence of some important conserved miRNA families, miR396, miR319, miR399, miR858, miR5083 and miR6111 not identified so far in A. annua. The expression patterns and correlation between miRNAs and their corresponding targets at different developmental stages of the plant using real-time PCR indicate that they may influence ART accumulation. These findings thus, open new possibilities for the rational engineering of the secondary metabolite pathways in general and ART biosynthesis in particular.

Indexed as

Artemisia annuaArtemisininsGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGene Regulatory NetworksHigh-Throughput Nucleotide SequencingMicroRNAsPlant LeavesRNA, PlantSequence Analysis, RNAartemisininArtemisininsMicroRNAsRNA, Plant

Identifiers

PMID32788629
PMCPMC7423619
OpenAlexW3048537431

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.