Evidence map›Paper›PMID 32788179›Full record

ArticlemBio2020

Pathogenesis of Human Papillomaviruses Requires the ATR/p62 Autophagy-Related Pathway.

Shiyuan Hong, Yan Li, Paul J Kaminski, Jorge Andrade, Laimonis A Laimins

Open access · goldAbstract read
In one paragraph

Article in mBio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Shiyuan HongDepartment of Microbiology-Immunology, Northwestern University, Feinberg School of Medicine, Chicago, Illinois, USA shiyuan-hong@northwestern.edu l-laimins@northwestern.edu.
Yan LiCenter for Research Informatics, The University of Chicago, Chicago, Illinois, USA.
Paul J KaminskiDepartment of Microbiology-Immunology, Northwestern University, Feinberg School of Medicine, Chicago, Illinois, USA.
Jorge AndradeCenter for Research Informatics, The University of Chicago, Chicago, Illinois, USA.
Laimonis A LaiminsDepartment of Microbiology-Immunology, Northwestern University, Feinberg School of Medicine, Chicago, Illinois, USA shiyuan-hong@northwestern.edu l-laimins@northwestern.edu.ORCID 0000-0002-6314-623X
Northwestern University · USUniversity of Chicago · US

Funding

REGULATION OF HUMAN PAPILLOMAVIRUS GENE EXPRESSIONR01CA059655 · NCI · UNIVERSITY OF CHICAGO · PI LAIMINS, LAIMONIS A. · 1993 to 2023
$7.4M
Renewal: HPV and the DNA Damage ResponseR01CA142861 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Laimonis A. LAIMINS · 2010 to 2026
$5.2M
NCI NIH HHS R01 CA059655NCI NIH HHS R01 CA142861
6 · The paper itself

Abstract

High-risk human papillomaviruses (HPVs) constitutively activate the ataxia telangiectasia and Rad3-related (ATR) DNA damage response pathway, and this is required for viral replication. In fibroblasts, activated ATR regulates transcription of inflammatory genes through its negative effects on the autophagosome cargo protein p62. In addition, suppression of p62 results in increased levels of the transcription factor GATA4, leading to cellular senescence. In contrast, in HPV-positive keratinocytes, we observed that activation of ATR resulted in increased levels of phosphorylated p62, which in turn lead to reduced levels of GATA4. Knockdown of ATR in HPV-positive cells resulted in decreased p62 phosphorylation and increased GATA4 levels. Transcriptome sequencing (RNA-seq) analysis of HPV-positive cells identified inflammatory genes and interferon factors as negative transcriptional targets of ATR. Furthermore, knockdown of p62 or overexpression of GATA4 in HPV-positive cells leads to inhibition of viral replication. These findings identify a novel role of the ATR/p62 signaling pathway in HPV-positive cells.

Indexed as

AlphapapillomavirusAtaxia Telangiectasia Mutated ProteinsAutophagyCell DifferentiationCell LineCells, CulturedFibroblastsGATA4 Transcription FactorHost-Pathogen InteractionsHumansInflammationKeratinocytesMalePapillomavirus InfectionsPhosphorylationRNA-Binding ProteinsAtaxia Telangiectasia Mutated ProteinsATR protein, humanGATA4 protein, humanGATA4 Transcription FactorP62 protein, humanRNA-Binding ProteinsDNA replicationGATA4HPVinflammationinterferonsp62

Identifiers

PMID32788179
PMCPMC7439466
OpenAlexW3048559472

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.