Evidence map›Paper›PMID 32784974›Full record

ArticlePlants (Basel, Switzerland)2020

Semi-Targeted Metabolomics to Validate Biomarkers of Grape Downy Mildew Infection Under Field Conditions.

Kévin Billet, Magdalena Anna Malinowska, Thibaut Munsch, Marianne Unlubayir, Sophie Adler, Guillaume Delanoue, Arnaud Lanoue

Abstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  7. Shoot Cultures ofMolecules (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Kévin BilletEA2106 "Biomolécules et Biotechnologies Végétales", UFR des Sciences Pharmaceutiques "Philippe Maupas", Université de Tours, 31 av. Monge, F37200 Tours, France.
Magdalena Anna MalinowskaEA2106 "Biomolécules et Biotechnologies Végétales", UFR des Sciences Pharmaceutiques "Philippe Maupas", Université de Tours, 31 av. Monge, F37200 Tours, France.
Thibaut MunschEA2106 "Biomolécules et Biotechnologies Végétales", UFR des Sciences Pharmaceutiques "Philippe Maupas", Université de Tours, 31 av. Monge, F37200 Tours, France.ORCID 0000-0003-3002-2828
Marianne UnlubayirEA2106 "Biomolécules et Biotechnologies Végétales", UFR des Sciences Pharmaceutiques "Philippe Maupas", Université de Tours, 31 av. Monge, F37200 Tours, France.
Sophie AdlerEA2106 "Biomolécules et Biotechnologies Végétales", UFR des Sciences Pharmaceutiques "Philippe Maupas", Université de Tours, 31 av. Monge, F37200 Tours, France.
Guillaume DelanoueInstitut Français de la Vigne et du Vin, 509 avenue Chanteloup, F37400 Amboise, France.
Arnaud LanoueEA2106 "Biomolécules et Biotechnologies Végétales", UFR des Sciences Pharmaceutiques "Philippe Maupas", Université de Tours, 31 av. Monge, F37200 Tours, France.ORCID 0000-0002-7377-8177

Funding

Conseil Régional du Centre-Val de Loire VINODRONE, CEPATLAS, PRESTO
6 · The paper itself

Abstract

Grape downy mildew is a devastating disease worldwide and new molecular phenotyping tools are required to detect metabolic changes associated to plant disease symptoms. In this purpose, we used UPLC-DAD-MS-based semi-targeted metabolomics to screen downy mildew symptomatic leaves that expressed oil spots (6 dpi, days post-infection) and necrotic lesions (15 dpi) under natural infections in the field. Leaf extract analyses enabled the identification of 47 metabolites belonging to the primary metabolism including 6 amino acids and 1 organic acid, as well as an important diversity of specialized metabolites including 9 flavonols, 11 flavan-3-ols, 3 phenolic acids, and stilbenoids with various degree of polymerization (DP) including 4 stilbenoids DP1, 8 stilbenoids DP2, and 4 stilbenoids DP3. Principal component analysis (PCA) was applied as unsupervised multivariate statistical analysis method to reveal metabolic variables that were affected by the infection status. Univariate and multivariate statistics revealed 33 and 27 metabolites as relevant infection biomarkers at 6 and 15 dpi, respectively. Correlation-based networks highlighted a general decrease of flavonoid-related metabolites, whereas stilbenoid DP1 and DP2 concentrations increased upon downy mildew infection. Stilbenoids DP3 were identified only in necrotic lesions representing late biomarkers of downy mildew infection.

Indexed as

correlation networkdowny mildewgrapeinfection biomarkerspolyphenolssemi-targeted metabolomicsstilbenoids

Identifiers

PMID32784974
PMCPMC7465342

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.