Evidence map›Paper›PMID 32784779›Full record

ArticleAnimals : an open access journal from MDPI2020

Compositional and Functional Characteristics of Swine Slurry Microbes through 16S rRNA Metagenomic Sequencing Approach.

Himansu Kumar, Yu Na Jang, Kwangmin Kim, Junhyung Park, Min Woong Jung, Jong-Eun Park

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Himansu KumarDivision of Animal Genomics and Bioinformatics, National Institute of Animal Science, RDA, Wanju 55365, Korea.ORCID 0000-0002-4335-4517
Yu Na JangAnimal Environment Division, National Institute of Animal Science, RDA, Wanju 55365, Korea.ORCID 0000-0003-1727-4959
Kwangmin Kim3 BIGS CO. LTD., Hwaseong 18454, Korea.
Junhyung Park3 BIGS CO. LTD., Hwaseong 18454, Korea.
Min Woong JungAnimal Environment Division, National Institute of Animal Science, RDA, Wanju 55365, Korea.
Jong-Eun ParkDivision of Animal Genomics and Bioinformatics, National Institute of Animal Science, RDA, Wanju 55365, Korea.ORCID 0000-0003-0718-3463
National Institute of Animal Science · KR

Funding

Rural Development Administration PJ01252102
6 · The paper itself

Abstract

Traditionally slurry is used as source of nitrogen, phosphorous, and potassium in bio fertilizers to improve crop production. However, poorly managed slurry causes a hazardous effect to the environment by producing greenhouse gases, causing the eutrophication of water bodies, and polluting the groundwater. It has been largely reported that the microbial presence in slurry causing a diverse effect on its storage and disposal system. However, the diversity of bacterial populations in pig slurries remains largely unexplored. Here we report the bacterial diversity present in the slurry from slurry pits, and the effect of storage time on bacterial population. We collected 42 samples from three different pig slurry pits, as three replicates from each one until the 14th week. We used the 16S rRNA, Quantitative Insights Into Microbial Ecology (QIIME) and Phylogenetic Investigation of Communities by Reconstruction of Unobserved States (PICRUSt) protocols for the metagenomic downstream analysis. Taxonomic annotation using the Greengenes metagenomic database indicated that on an average 76.2%

Indexed as

16S rRNA sequencingGreengenes databasemicrobiotaQIIME

Identifiers

PMID32784779
PMCPMC7460454
OpenAlexW3048349052

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.