Evidence map›Paper›PMID 32784357›Full record

ArticleInternational journal of molecular sciences2020

Phenylpropanoids Are Connected to Cell Wall Fortification and Stress Tolerance in Avocado Somatic Embryogenesis.

Carol A Olivares-García, Martín Mata-Rosas, Carolina Peña-Montes, Francisco Quiroz-Figueroa, Aldo Segura-Cabrera, Laura M Shannon, Victor M Loyola-Vargas, Juan L Monribot-Villanueva, Jose M Elizalde-Contreras, Enrique Ibarra-Laclette and 3 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 51 citations in OpenAlex.

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  10. Transcriptomic and Metabolomic Investigation on Leaf Necrosis Induced byInternational journal of molecular sciences · 2023
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  14. Mechanisms in Growth-Promoting of Cucumber by the Endophytic FungusJournal of fungi (Basel, Switzerland) · 2022
    Article
  15. Review
  16. Article
  17. Plant Proteomic Research 3.0: Challenges and Perspectives.International journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Carol A Olivares-GarcíaRed de Manejo Biotecnológico de Recursos, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Congregación el Haya, Xalapa, Veracruz CP 91073, Mexico.
Martín Mata-RosasRed de Manejo Biotecnológico de Recursos, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Congregación el Haya, Xalapa, Veracruz CP 91073, Mexico.
Carolina Peña-MontesTecnológico Nacional de México, Instituto Tecnológico de Veracruz, Unidad de Investigación y Desarrollo en Alimentos, Veracruz CP 91897, Mexico.ORCID 0000-0002-4767-1210
Francisco Quiroz-FigueroaInstituto Politécnico Nacional, Centro Interdisciplinario de Investigación para el Desarrollo Integral Regional-Unidad Sinaloa, Boulevard Juan de Dios Bátiz Paredes # 250, Col. San Joachin, Guasave, Sinaloa 81101, Mexico.ORCID 0000-0002-1950-4810
Aldo Segura-CabreraEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Laura M ShannonDepartment of Horticultural Science, University of Minnesota, Saint Paul, MN 55108, USA.
Victor M Loyola-VargasUnidad de Bioquímica y Biología Molecular de Plantas, Centro de Investigación Científica de Yucatán, Mérida, Yucatán CP 97205, Mexico.ORCID 0000-0001-5386-4265
Juan L Monribot-VillanuevaRed de Estudios Moleculares Avanzados, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Congregación el Haya, Xalapa, Veracruz CP 91073, Mexico.
Jose M Elizalde-ContrerasRed de Estudios Moleculares Avanzados, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Congregación el Haya, Xalapa, Veracruz CP 91073, Mexico.
Enrique Ibarra-LacletteRed de Estudios Moleculares Avanzados, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Congregación el Haya, Xalapa, Veracruz CP 91073, Mexico.ORCID 0000-0003-1441-1938
Mónica Ramirez-VázquezRed de Estudios Moleculares Avanzados, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Congregación el Haya, Xalapa, Veracruz CP 91073, Mexico.
José A Guerrero-AnalcoRed de Estudios Moleculares Avanzados, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Congregación el Haya, Xalapa, Veracruz CP 91073, Mexico.ORCID 0000-0003-0998-757X
Eliel Ruiz-MayRed de Estudios Moleculares Avanzados, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Congregación el Haya, Xalapa, Veracruz CP 91073, Mexico.ORCID 0000-0003-1416-4973
Instituto de Ecología · MXTecnológico Nacional de México · MXEuropean Bioinformatics Institute · GBInstituto Politécnico Nacional · MXSecretaría de Investigación, Innovación y Educación Superior · MXUniversity of Minnesota · US

Funding

Consejo Nacional de Ciencia y Tecnología FORDECYT 29239Consejo Nacional de Ciencia y Tecnología SAGARPA-SENASICA 259915
6 · The paper itself

Abstract

Somatic embryogenesis (SE) is a valuable model for understanding the mechanism of plant embryogenesis and a tool for the mass production of plants. However, establishing SE in avocado has been complicated due to the very low efficiency of embryo induction and plant regeneration. To understand the molecular foundation of the SE induction and development in avocado, we compared embryogenic (EC) and non-embryogenic (NEC) cultures of two avocado varieties using proteomic and metabolomic approaches. Although Criollo and Hass EC exhibited similarities in the proteome and metabolome profile, in general, we observed a more active phenylpropanoid pathway in EC than NEC. This pathway is associated with the tolerance of stress responses, probably through the reinforcement of the cell wall and flavonoid production. We could corroborate that particular polyphenolics compounds, including

Indexed as

Adaptation, PhysiologicalPlant Somatic Embryogenesis TechniquesStress, PhysiologicalCell WallMetabolomicsModels, BiologicalPerseaPhenotypePlant ProteinsPolyphenolsPrincipal Component AnalysisPropanolsProteomics1-phenylpropanolPlant ProteinsPolyphenolsPropanolsembryogenic culturesmetabolomicsphenolic compoundsplant cell wallproteomics

Identifiers

PMID32784357
PMCPMC7460882
OpenAlexW3048117074

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.