Evidence map›Paper›PMID 32783915›Full record

ArticleCell2020

Coupled scRNA-Seq and Intracellular Protein Activity Reveal an Immunosuppressive Role of TREM2 in Cancer.

Yonatan Katzenelenbogen, Fadi Sheban, Adam Yalin, Ido Yofe, Dmitry Svetlichnyy, Diego Adhemar Jaitin, Chamutal Bornstein, Adi Moshe, Hadas Keren-Shaul, Merav Cohen and 6 more

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 314 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
314citing papers in PubMed, 1 pooled it
24.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

314 citing papers in PubMed, 1 synthesis or guideline pooled it, 480 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Hierarchical Targeting of TREM2Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Involvement of increased arginase-1The Journal of international medical research · 2026
    Article

254 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 1 institution in 1 country.

Yonatan KatzenelenbogenDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Fadi ShebanDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Adam YalinDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Ido YofeDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Dmitry SvetlichnyyDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Diego Adhemar JaitinDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Chamutal BornsteinDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Adi MosheDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Hadas Keren-ShaulDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Merav CohenDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Shuang-Yin WangDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Baoguo LiDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Eyal DavidDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel.
Tomer-Meir SalameFlow Cytometry Unit, Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot 76100, Israel.
Assaf WeinerDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel. Electronic address: assaf.weiner@weizmann.ac.il.
Ido AmitDepartment of Immunology, Weizmann Institute, Rehovot 76100, Israel. Electronic address: ido.amit@weizmann.ac.il.
Weizmann Institute of Science · IL

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Cell function and activity are regulated through integration of signaling, epigenetic, transcriptional, and metabolic pathways. Here, we introduce INs-seq, an integrated technology for massively parallel recording of single-cell RNA sequencing (scRNA-seq) and intracellular protein activity. We demonstrate the broad utility of INs-seq for discovering new immune subsets by profiling different intracellular signatures of immune signaling, transcription factor combinations, and metabolic activity. Comprehensive mapping of Arginase 1-expressing cells within tumor models, a metabolic immune signature of suppressive activity, discovers novel Arg1

Indexed as

AnimalsArginaseCD8-Positive T-LymphocytesDendritic CellsFemaleGene Expression RegulationHumansLeukocytes, MononuclearLipopolysaccharidesMembrane GlycoproteinsMiceMice, Inbred C57BLNeoplasmsp38 Mitogen-Activated Protein KinasesReceptors, ImmunologicRNA, Small CytoplasmicArginaseLipopolysaccharidesMembrane Glycoproteinsp38 Mitogen-Activated Protein KinasesReceptors, ImmunologicRNA, Small CytoplasmicTranscription FactorsTrem2 protein, mouseTumor Necrosis Factor-alphacancer immunologyfixationimmunotherapyintracellular stainingMDSCmyeloid suppressive cellsscRNA-seqsingle cell genomicsTrem2tumor microenvironment

Identifiers

PMID32783915
OpenAlexW3048711673

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.