Evidence map›Paper›PMID 32783358›Full record

ReviewChembiochem : a European journal of chemical biology2021

Cell-Free Exploration of the Natural Product Chemical Space.

Jonathan W Bogart, Maria D Cabezas, Bastian Vögeli, Derek A Wong, Ashty S Karim, Michael C Jewett

Abstract readReview
In one paragraph

Review in Chembiochem : a European journal of chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Cell-free Biosynthesis of Peptidomimetics.Biotechnology and bioprocess engineering : BBE · 2023
    Review
  12. Rewiring cell-free metabolic flux inSynthetic biology (Oxford, England) · 2023
    Article
  13. Article
  14. Review
  15. Review
  16. A roadmap for metagenomic enzyme discovery.Natural product reports · 2021
    Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jonathan W BogartDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, IL, 60208, USA.ORCID 0000-0002-2489-1931
Maria D CabezasDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, IL, 60208, USA.ORCID 0000-0002-0861-9735
Bastian VögeliDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, IL, 60208, USA.ORCID 0000-0001-7870-7311
Derek A WongDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, IL, 60208, USA.ORCID 0000-0002-1405-7310
Ashty S KarimDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, IL, 60208, USA.ORCID 0000-0002-5789-7715
Michael C JewettDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, IL, 60208, USA.ORCID 0000-0003-2948-6211

Funding

Innovative technologies to transform antibiotic discovery. Project 4 Infection site-specific amplification of antimicrobial conjugatesU19AI142780 · NIAID · BROAD INSTITUTE, INC. · PI HUNG, DEBORAH T · 2019 to 2023
$33.9M
NIAID NIH HHS U19 AI142780
6 · The paper itself

Abstract

Natural products and secondary metabolites comprise an indispensable resource from living organisms that have transformed areas of medicine, agriculture, and biotechnology. Recent advances in high-throughput DNA sequencing and computational analysis suggest that the vast majority of natural products remain undiscovered. To accelerate the natural product discovery pipeline, cell-free metabolic engineering approaches used to develop robust catalytic networks are being repurposed to access new chemical scaffolds, and new enzymes capable of performing diverse chemistries. Such enzymes could serve as flexible biocatalytic tools to further expand the unique chemical space of natural products and secondary metabolites, and provide a more sustainable route to manufacture these molecules. Herein, we highlight select examples of natural product biosynthesis using cell-free systems and propose how cell-free technologies could facilitate our ability to access and modify these structures to transform synthetic and chemical biology.

Indexed as

Biological ProductsHigh-Throughput Nucleotide SequencingMetabolic EngineeringMolecular StructureBiological Products

Identifiers

PMID32783358
PMCPMC8215586

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.