Evidence map›Paper›PMID 32782292›Full record

ArticleNature communications2020

Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown.

Lucy I Crouch, Marcelo V Liberato, Paulina A Urbanowicz, Arnaud Baslé, Christopher A Lamb, Christopher J Stewart, Katie Cooke, Mary Doona, Stephanie Needham, Richard R Brady and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed, 1 pooled it
9.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 1 synthesis or guideline pooled it, 139 citations in OpenAlex.

  1. Pooled it
  2. Discovery of a secretedGut microbes · 2026
    Article
  3. Review
  4. Article
  5. Gut microbes · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Reverse prediction of carbohydrate esterase polysaccharide targets.Biotechnology for biofuels and bioproducts · 2026
    Article
  10. The VaginalMicroorganisms · 2026
    Article
  11. Article
  12. Degradation of mucinbioRxiv : the preprint server for biology · 2026
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Mucinolysome in gut microbiomes of farm animals and humans.bioRxiv : the preprint server for biology · 2025
    Article
  19. The Biology ofAnnual review of microbiology · 2025
    Review
  20. Article

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 9 institutions in 4 countries.

Lucy I CrouchBiosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK. l.i.crouch@bham.ac.uk.ORCID http://orcid.org/0000-0003-1479-3534
Marcelo V LiberatoUniversidade de Sorocaba, Programa de Processos Tecnológicos e Ambientais, Sorocaba, Brasil.
Paulina A UrbanowiczLudger Ltd, Culham Science Centre, Abingdon, UK.ORCID http://orcid.org/0000-0003-4158-0462
Arnaud BasléBiosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.
Christopher A LambDepartment of Gastroenterology, Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.ORCID http://orcid.org/0000-0002-7271-4956
Christopher J StewartTranslational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.
Katie CookeTranslational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.
Mary DoonaDepartment of Gastroenterology, Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.
Stephanie NeedhamDepartment of Histopathology, Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.
Richard R BradyDepartment of Colorectal Surgery, Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.
Janet E BerringtonNewcastle Neonatal Service, Royal Victoria Infirmary, Newcastle upon Tyne, UK.
Katarina MadunicCentre for Proteomics and Metabolomics, Leiden University Medical Centre, Leiden, Netherlands.ORCID http://orcid.org/0000-0002-9310-4110
Manfred WuhrerCentre for Proteomics and Metabolomics, Leiden University Medical Centre, Leiden, Netherlands.ORCID http://orcid.org/0000-0002-0814-4995
Peter ChaterBiosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.
Jeffery P PearsonBiosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.
Robert GlowackiDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI, USA.
Eric C MartensDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI, USA.ORCID http://orcid.org/0000-0001-6681-2990
Fuming ZhangDepartment of Chemistry and Chemical Biology, Centre for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA.
Robert J LinhardtDepartment of Chemistry and Chemical Biology, Centre for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA.ORCID http://orcid.org/0000-0003-2219-5833
Daniel I R SpencerLudger Ltd, Culham Science Centre, Abingdon, UK.
David N BolamBiosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK. david.bolam@ncl.ac.uk.ORCID http://orcid.org/0000-0003-0314-3122
Newcastle University · GBNewcastle upon Tyne Hospitals NHS Foundation Trust · GBCulham Science Centre · GBLeiden University · NLRensselaer Polytechnic Institute · USUniversity of Michigan · USRoyal Victoria Infirmary · GBUniversidade de Sorocaba · BRUniversity of Birmingham · GB

Funding

Biotechnology and Biological Sciences Research Council BB/M029018/1
6 · The paper itself

Abstract

The thick mucus layer of the gut provides a barrier to infiltration of the underlying epithelia by both the normal microbiota and enteric pathogens. Some members of the microbiota utilise mucin glycoproteins as a nutrient source, but a detailed understanding of the mechanisms used to breakdown these complex macromolecules is lacking. Here we describe the discovery and characterisation of endo-acting enzymes from prominent mucin-degrading bacteria that target the polyLacNAc structures within oligosaccharide side chains of both animal and human mucins. These O-glycanases are part of the large and diverse glycoside hydrolase 16 (GH16) family and are often lipoproteins, indicating that they are surface located and thus likely involved in the initial step in mucin breakdown. These data provide a significant advance in our knowledge of the mechanism of mucin breakdown by the normal microbiota. Furthermore, we also demonstrate the potential use of these enzymes as tools to explore changes in O-glycan structure in a number of intestinal disease states.

Indexed as

Gastrointestinal MicrobiomeAnimalsBacteriaCrystallography, X-RayGlycoside HydrolasesHexosaminidasesHumansMembrane GlycoproteinsMolecular StructureMucinsPhylogenyPolysaccharidesStructure-Activity RelationshipSubstrate Specificityglycopeptide alpha-N-acetylgalactosaminidaseGlycoside HydrolasesHexosaminidasesMembrane GlycoproteinsMucinsPolysaccharides

Identifiers

PMID32782292
PMCPMC7419316
OpenAlexW2986341500

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.