Evidence map›Paper›PMID 32781716›Full record

ReviewInternational journal of molecular sciences2020

Assay Systems for Profiling Deubiquitinating Activity.

Jinhong Cho, Jinyoung Park, Eunice EunKyeong Kim, Eun Joo Song

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Cytotoxicity of bismuth(III) dithiocarbamate derivatives by promoting a mitochondrial-dependent apoptotic pathway and suppressing MCF-7 breast adenocarcinoma cell invasion.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2024
    Article
  6. An expanded lexicon for the ubiquitin code.Nature reviews. Molecular cell biology · 2023
    Review
  7. Article
  8. USP13: Multiple Functions and Target Inhibition.Frontiers in cell and developmental biology · 2022
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jinhong ChoBiomedical Research Institute, Korea Institute of Science and Technology, Seoul 02792, Korea.ORCID 0000-0002-8812-3659
Jinyoung ParkMolecular Recognition Research Center, Korea Institute of Science and Technology, Seoul 02792, Korea.
Eunice EunKyeong KimBiomedical Research Institute, Korea Institute of Science and Technology, Seoul 02792, Korea.ORCID 0000-0002-7707-8055
Eun Joo SongGraduate School of Pharmaceutical Sciences and College of Pharmacy, Ewha Womans University, Seoul 03760, Korea.ORCID 0000-0002-2420-6666
Korea Institute of Science and Technology · KREwha Womans University · KR

Funding

National Research Foundation of Korea 2017R1A2B3007224National Research Foundation of Korea 2019R1A2C2004052National Research Foundation of Korea 2020R1A4A4079494
6 · The paper itself

Abstract

Deubiquitinating enzymes regulate various cellular processes, particularly protein degradation, localization, and protein-protein interactions. The dysregulation of deubiquitinating enzyme (DUB) activity has been linked to several diseases; however, the function of many DUBs has not been identified. Therefore, the development of methods to assess DUB activity is important to identify novel DUBs, characterize DUB selectivity, and profile dynamic DUB substrates. Here, we review various methods of evaluating DUB activity using cell lysates or purified DUBs, as well as the types of probes used in these methods. In addition, we introduce some techniques that can deliver DUB probes into the cells and cell-permeable activity-based probes to directly visualize and quantify DUB activity in live cells. This review could contribute to the development of DUB inhibitors by providing important information on the characteristics and applications of various probes used to evaluate and detect DUB activity in vitro and in vivo.

Indexed as

AnimalsDeubiquitinating EnzymesEnzyme AssaysFluorescence PolarizationHumansMolecular ProbesUbiquitinUbiquitinationDeubiquitinating EnzymesMolecular ProbesUbiquitinactivity-based probescell permeabilitydeubiquitination assayUb-probes

Identifiers

PMID32781716
PMCPMC7460613
OpenAlexW3047576464

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.