Evidence map›Paper›PMID 32780737›Full record

ArticlePloS one2020

Transcriptome profiling and gene expression analyses of eggplant (Solanum melongena L.) under heat stress.

Aidong Zhang, Zongwen Zhu, Jing Shang, Shengmei Zhang, Haibin Shen, Xuexia Wu, Dingshi Zha

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

  1. Genome-Wide Characterization of thePlants (Basel, Switzerland) · 2026
    Article
  2. Review
  3. Gene Expression ofACS omega · 2025
    Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Overexpression of A Biotic Stress-InducibleInternational journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Aidong ZhangHorticultural Research Institute, Shanghai Key Laboratory of Protected Horticultural Technology, Shanghai Academy of Agricultural Sciences, Shanghai, China.
Zongwen ZhuHorticultural Research Institute, Shanghai Key Laboratory of Protected Horticultural Technology, Shanghai Academy of Agricultural Sciences, Shanghai, China.
Jing ShangCollege of Fisheries and Life Science, Shanghai Ocean University, Shanghai, China.
Shengmei ZhangCollege of Horticulture, Nanjing Agricultural University, Nanjing, China.
Haibin ShenHorticultural Research Institute, Shanghai Key Laboratory of Protected Horticultural Technology, Shanghai Academy of Agricultural Sciences, Shanghai, China.
Xuexia WuHorticultural Research Institute, Shanghai Key Laboratory of Protected Horticultural Technology, Shanghai Academy of Agricultural Sciences, Shanghai, China.
Dingshi ZhaHorticultural Research Institute, Shanghai Key Laboratory of Protected Horticultural Technology, Shanghai Academy of Agricultural Sciences, Shanghai, China.ORCID 0000-0001-7146-8557
Shanghai Academy of Agricultural Sciences · CNNanjing Agricultural University · CNShanghai Ocean University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Global warming induces heat stress in eggplant, seriously affecting its quality and yield. The response to heat stress is a complex regulatory process; however, the exact mechanism in eggplant is unknown. We analyzed the transcriptome of eggplant under different high-temperature treatments using RNA-Seq technology. Three libraries treated at high temperatures were generated and sequenced. There were 40,733,667, 40,833,852, and 40,301,285 clean reads with 83.98%, 79.69%, and 84.42% of sequences mapped to the eggplant reference genome in groups exposed to 28°C (CK), 38°C (T38), and 43°C (T43), respectively. There were 3,067 and 1,456 DEGs in T38 vs CK and T43 vs CK groups, respectively. In these two DEG groups, 315 and 342 genes were up- and down-regulated, respectively, in common. Differential expression patterns of DEGs in antioxidant enzyme systems, detoxication, phytohormones, and transcription factors under heat stress were investigated. We screened heat stress-related genes for further validation by qRT-PCR. Regulation mechanisms may differ under different temperature treatments, in which heat shock proteins and heat stress transcription factors play vital roles. These results provide insight into the molecular mechanisms of the heat stress response in eggplant and may be useful in crop breeding.

Indexed as

Gene Expression Regulation, PlantAntioxidantsGene Expression ProfilingGenes, PlantHeat-Shock ProteinsHeat-Shock ResponsePlant Growth RegulatorsPlant ProteinsRNA, PlantRNA-SeqSolanum melongenaTranscription FactorsAntioxidantsHeat-Shock ProteinsPlant Growth RegulatorsPlant ProteinsRNA, PlantTranscription Factors

Identifiers

PMID32780737
PMCPMC7419001
OpenAlexW3048405943

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.