Evidence map›Paper›PMID 32780732›Full record

ArticlePloS one2020

Identification of common and divergent gene expression signatures in patients with venous and arterial thrombosis using data from public repositories.

Bidossessi Wilfried Hounkpe, Rafaela de Oliveira Benatti, Benilton de Sá Carvalho, Erich Vinicius De Paula

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Bidossessi Wilfried HounkpeSchool of Medical Sciences, University of Campinas, Campinas, SP, Brazil.ORCID 0000-0002-9992-1939
Rafaela de Oliveira BenattiSchool of Medical Sciences, University of Campinas, Campinas, SP, Brazil.
Benilton de Sá CarvalhoDepartment of Statistics, Institute of Mathematics, Statistics and Scientific Computing, University of Campinas, Campinas, SP, Brazil.
Erich Vinicius De PaulaSchool of Medical Sciences, University of Campinas, Campinas, SP, Brazil.ORCID 0000-0003-1539-7912
Universidade Estadual de Campinas (UNICAMP) · BR

Funding

Biotechnology and Biological Sciences Research Council BB/P027849/1
6 · The paper itself

Abstract

strengths and limitations of this studyOur results represent the first comparison of venous and arterial thrombosis at the transcriptomic level.Our main result was the demonstration that immunothrombosis pathways are important to the pathophysiology of these conditions, also at the transcriptomic level.A specific signature for venous and arterial thrombosis was described, and validated in independent cohorts.The limited number of public repositories with gene expression data from patients with venous thromboembolism limits the representation of these patients in our analyses.In order to gather a meaningful number of studies with gene expression data we had to include patients in different time-points since the index thrombotic event, which might have increased the heterogeneity of our population.

Indexed as

TranscriptomeCoronary ThrombosisDatasets as TopicGenetic HeterogeneityHumansMachine LearningVenous Thrombosis

Identifiers

PMID32780732
PMCPMC7418995
OpenAlexW3048668798

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.