Evidence map›Paper›PMID 32778990›Full record

ArticleJournal of clinical immunology2020

APDS2 and SHORT Syndrome in a Teenager with PIK3R1 Pathogenic Variant.

Lourdes Ramirez, Wendy Tamayo, Hanadys Ale

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In one paragraph

Article in Journal of clinical immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 3 pooled it
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 3 syntheses or guidelines pooled it, 23 citations in OpenAlex.

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  3. Systematic review of mortality and survival rates for APDS.Clinical and experimental medicine · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Lourdes RamirezDepartment of Pediatrics, Joe DiMaggio Children's Hospital, 1005 Joe DiMaggio Dr, Hollywood, FL, 33021, USA. Louramirez@mhs.net.ORCID 0000-0003-4942-0471
Wendy TamayoDepartment of Medicine, Herbert Wertheim College of Medicine, 11200 SW 8th St, Miami, FL, 33199, USA.
Hanadys AleDepartment of Pediatric Allergy and Immunology, Joe DiMaggio Children's Hospital, 1005 Joe DiMaggio Dr, Hollywood, FL, 33021, USA.
Joe DiMaggio Children's Hospital · USDr. Herbert & Nicole Wertheim Family Foundation · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Activated PI3K δ syndrome (APDS) is a primary immunodeficiency caused by heterogeneous germline gain-of-function mutations which ultimately lead to the hyperactivation of the phosphoinositide-3-kinase δ (PI3K δ). PI3K δ exists as a heterodimer composed of a catalytic and a regulatory subunit. APDS type 2 is caused by mutations in the PIK3R1 gene affecting the p85α regulatory subunit. SHORT syndrome is a rare multisystem disorder characterized by short stature, hyperextensible joints, ocular depression, Rieger anomaly, and tooth eruption delay. The primary causes of SHORT syndrome are heterozygous loss-of-function mutations in the PIK3R1 gene. The combination of APDS2 and SHORT syndrome is rare, with few cases reported to date. Here we describe a 17-year-old female with phenotypic features consistent with SHORT syndrome and history of sinopulmonary infections and hypogammaglobulinemia. Invitae immunodeficiency panel genetic testing revealed a pathogenic loss-of-function variant in an intronic splice site in the gene PIK3R1 (c.1425 + 1G > C). This pathogenic variant had been previously associated with APDS2; however, it had not been associated with SHORT syndrome. The exact mechanisms linking both conditions are yet to be identified. This case report emphasizes the importance of screening for comorbidities associated with SHORT syndrome in APDS2 patients and vice versa.

Indexed as

Genetic VariationAdolescentAllelesClass Ia Phosphatidylinositol 3-KinaseClass I Phosphatidylinositol 3-KinasesFemaleGenetic TestingGenotypeGrowth DisordersHumansHypercalcemiaMetabolic DiseasesMutationNephrocalcinosisPhenotypePrimary Immunodeficiency DiseasesClass Ia Phosphatidylinositol 3-KinaseClass I Phosphatidylinositol 3-KinasesPIK3R1 protein, humanAPDSPIK3R1primary immunodeficienciesSHORT syndrome

Identifiers

PMID32778990
OpenAlexW3048732855

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.