Evidence map›Paper›PMID 32773772›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2020

Constitutional mismatch repair deficiency is the diagnosis in 0.41% of pathogenic NF1/SPRED1 variant negative children suspected of sporadic neurofibromatosis type 1.

Juan A Perez-Valencia, Richard Gallon, Yunjia Chen, Jakob Koch, Markus Keller, Klaus Oberhuber, Alicia Gomes, Johannes Zschocke, John Burn, Michael S Jackson and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 2 pooled it
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 2 syntheses or guidelines pooled it, 21 citations in OpenAlex.

  1. Genotype-phenotype correlations inOncology reviews · 2025
    Pooled it
  2. Guideline
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Do non-pathogenic variants of DNA mismatch repair genes modify neurofibroma load in neurofibromatosis type 1?Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2022
    Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 3 countries.

Juan A Perez-Valencia *Institute of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria.
Richard Gallon *Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.
Yunjia ChenDepartment of Genetics, University of Alabama at Birmingham, Birmingham, AL, USA.
Jakob KochInstitute of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria.
Markus KellerInstitute of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria.
Klaus OberhuberInstitute of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria.
Alicia GomesDepartment of Genetics, University of Alabama at Birmingham, Birmingham, AL, USA.
Johannes ZschockeInstitute of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria.
John BurnFaculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.
Michael S JacksonFaculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.
Mauro Santibanez-KorefFaculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK.
Ludwine MessiaenDepartment of Genetics, University of Alabama at Birmingham, Birmingham, AL, USA.
Katharina WimmerInstitute of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria. katharina.wimmer@i-med.ac.at.ORCID http://orcid.org/0000-0002-0732-7538
Innsbruck Medical University · ATNewcastle University · GBUniversity of Alabama at Birmingham · US

Funding

Austrian Science Fund (FWF) KLI 734-B26Austrian Science Fund FWF KLI 734
6 · The paper itself

Abstract

purposeBiallelic germline mismatch repair (MMR) gene pathogenic variants (PVs) cause constitutional MMR deficiency (CMMRD), a highly penetrant childhood cancer syndrome phenotypically overlapping with neurofibromatosis type 1 (NF1). CMMRD testing in suspected NF1 children without NF1/SPRED1 PVs enables inclusion of CMMRD positives into monitoring programs prior to tumor onset. However, testing is associated with potential harms and the prevalence of CMMRD among these children is unknown.

methodsUsing a simple and scalable microsatellite instability (MSI) assay of non-neoplastic leukocyte DNA to detect CMMRD, we retrospectively screened >700 children suspected of sporadic NF1 but lacking NF1/SPRED1 PVs.

resultsFor three of seven MSI-positive patients germline MMR gene PVs confirmed the diagnosis of CMMRD. Founder variants NM_000535.5(PMS2):c.736_741delinsTGTGTGTGAAG, prevalent in Europe and North America, and NM_000179.2(MSH6):c.10C>G, affecting 1:400 French Canadians, represented two of five PVs. The prevalence of CMMRD was 3/735 (0.41%, 95% confidence interval [CI]: 0.08-1.19%).

conclusionOur empirical data provide reliable numbers for genetic counseling and confirm previous prevalence estimations, on which Care for CMMRD consortium guidelines are based. These advocate CMMRD testing of preselected patients rather than offering reflex testing to all suspected sporadic NF1 children lacking NF1/SPRED1 PVs. The possibility of founder effects should be considered alongside these testing guidelines.

Indexed as

Colorectal NeoplasmsNeurofibromatosis 1Adaptor Proteins, Signal TransducingBrain NeoplasmsCanadaChildDNA Mismatch RepairEuropeHumansMismatch Repair Endonuclease PMS2Neoplastic Syndromes, HereditaryNorth AmericaRetrospective StudiesAdaptor Proteins, Signal TransducingMismatch Repair Endonuclease PMS2SPRED1 protein, humanchildhood cancerconstitutional mismatch repair deficiencyfounder variantmicrosatellite instabilityneurofibromatosis type 1

Identifiers

PMID32773772
PMCPMC7708300
OpenAlexW3047737027

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.