Evidence map›Paper›PMID 32772216›Full record

ArticleThe protein journal2020

Oligomerization of A. thaliana Heterotrimeric G Protein Subunits AGB1 and AGG2 In Vitro.

Burcu Kaplan-Türköz, Anıl Aktürk, Zehra Sayers

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In one paragraph

Article in The protein journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 55% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Burcu Kaplan-TürközBiological Sciences and Bioengineering, Faculty of Engineering and Natural Sciences, Sabancı University, Orhanlı, 34956, Tuzla, Istanbul, Turkey. bkaplan@sabanciuniv.edu.ORCID http://orcid.org/0000-0003-3040-3321
Anıl AktürkBiological Sciences and Bioengineering, Faculty of Engineering and Natural Sciences, Sabancı University, Orhanlı, 34956, Tuzla, Istanbul, Turkey.ORCID http://orcid.org/0000-0002-5792-4840
Zehra SayersBiological Sciences and Bioengineering, Faculty of Engineering and Natural Sciences, Sabancı University, Orhanlı, 34956, Tuzla, Istanbul, Turkey.ORCID http://orcid.org/0000-0003-3653-4736
Sabancı Üniversitesi · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant heterotrimeric G proteins are a major group of signaling molecules involved in regulation of critical processes including stress adaptation, seed size, grain quality and immune responses. Despite an abundance of in situ functional studies; purification of the individual subunits of the plant heterotrimer for biophysical and structural characterization and for studies on their interactions are lacking. In this study cloning of the genes encoding the β subunit AGB1 of A. thaliana and its γ-subunits AGG1 and AGG2 using different E. coli expression vectors and screening of expression in several strains are reported. AGB1 could be expressed albeit at very low levels and in all cases it was accompanied by overexpression of E. coli chaperone proteins. AGG1 could only be detected in inclusion body fractions, whereas AGG2 was obtained in soluble fractions and was purified. Purified AGB1 and AGG2 subunits were shown to dimerize in vitro. Further characterization of AGG2 by small angle X-ray scattering measurements and by dynamic light scattering revealed that AGG2 formed homodimers with extended shape in solution. These results are also consistent with those from circular dichroism spectroscopy which yielded 39.4% helical and 50% random coil content for AGG2. This is the first study showing heterologous expression of a plant heterotrimeric G protein β subunit individually and presenting its interaction with a plant γ-subunit in vitro. Results also show that the AGG2 subunit has a disordered structure, which would account for its role in diverse interactions for establishing selectivity in signal propagation.

Indexed as

Protein MultimerizationArabidopsisArabidopsis ProteinsGTP-Binding Protein beta SubunitsGTP-Binding Protein gamma SubunitsRecombinant ProteinsAGB1 protein, ArabidopsisAGG2 protein, ArabidopsisArabidopsis ProteinsGTP-Binding Protein beta SubunitsGTP-Binding Protein gamma SubunitsRecombinant ProteinsArabidopsisBacterial recombinant expressionBiophysical characterizationHeterotrimeric G proteinsSAXS

Identifiers

PMID32772216
OpenAlexW3048055793

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.