Evidence map›Paper›PMID 32770037›Full record

ArticleScientific reports2020

Construction of gateway-compatible baculovirus expression vectors for high-throughput protein expression and in vivo microcrystal screening.

Yanyang Tang, Justin Saul, Nirupa Nagaratnam, Jose M Martin-Garcia, Petra Fromme, Ji Qiu, Joshua LaBaer

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. High-throughput structure determination of an intrinsically disordered protein using cell-free protein crystallization.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. Article
  6. Can (We Make)Toxins · 2021
    Review
  7. Rapid screening ofJournal of applied crystallography · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yanyang TangSchool of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA.
Justin SaulVirginia G. Piper Center for Personalized Diagnostics, The Biodesign Institute, Arizona State University, Tempe, AZ, 85281, USA.
Nirupa NagaratnamSchool of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA.
Jose M Martin-GarciaCenter for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, AZ, 85281, USA.
Petra FrommeSchool of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA.
Ji QiuVirginia G. Piper Center for Personalized Diagnostics, The Biodesign Institute, Arizona State University, Tempe, AZ, 85281, USA. Ji.Qiu@asu.edu.
Joshua LaBaerSchool of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA. Joshua.Labaer@asu.edu.
Arizona State University · US

Funding

Femtosecond nano-crystallography of membrane proteinsR01GM095583 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI FROMME, PETRA · 2010 to 2023
$4.3M
6 · The paper itself

Abstract

Baculovirus mediated-insect cell expression systems have been widely used for producing heterogeneous proteins. However, to date, there is still the lack of an easy-to-manipulate system that enables the high-throughput protein characterization in insect cells by taking advantage of large existing Gateway clone libraries. To resolve this limitation, we have constructed a suite of Gateway-compatible pIEx-derived baculovirus expression vectors that allow the rapid and cost-effective construction of expression clones for mass parallel protein expression in insect cells. This vector collection also supports the attachment of a variety of fusion tags to target proteins to meet the needs for different research applications. We first demonstrated the utility of these vectors for protein expression and purification using a set of 40 target proteins of various sizes, cellular localizations and host organisms. We then established a scalable pipeline coupled with the SONICC and TEM techniques to screen for microcrystal formation within living insect cells. Using this pipeline, we successfully identified microcrystals for ~ 16% of the tested protein set, which can be potentially used for structure elucidation by X-ray crystallography. In summary, we have established a versatile pipeline enabling parallel gene cloning, protein expression and purification, and in vivo microcrystal screening for structural studies.

Indexed as

BaculoviridaeGene ExpressionGenetic VectorsAnimalsCrystallography, X-RayMicroscopy, Electron, TransmissionRecombinant ProteinsSf9 CellsSpodopteraRecombinant Proteins

Identifiers

PMID32770037
PMCPMC7414197
OpenAlexW3047716692

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.