Evidence map›Paper›PMID 32766996›Full record

ArticlePhotosynthesis research2020

The role of vibronic modes in formation of red antenna states of cyanobacterial PSI.

Roman Y Pishchalnikov, Vladimir V Shubin, Andrei P Razjivin

Erratum issuedAbstract read
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In one paragraph

Article in Photosynthesis research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Roman Y PishchalnikovProkhorov General Physics Institute of the Russian Academy of Sciences, Moscow, Russia. rpishchal@kapella.gpi.ru.ORCID http://orcid.org/0000-0002-5955-6092
Vladimir V ShubinBach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia.
Andrei P RazjivinLomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, Moscow, Russia.
A N Bach Institute of Biochemistry · RULomonosov Moscow State University · RUProkhorov General Physics Institute · RU

Funding

Российский Фонд Фундаментальных Исследований (РФФИ) 19-01-00696
6 · The paper itself

Abstract

Cyanobacterial photosystem I (PSI) constitutes monomeric and trimeric pigment-protein complexes whose optical properties are marked by the presence of long-wavelength absorption bands. In spite of numerous experimental studies, the nature of these bands is still under debate and requires intensive theoretical analysis. Collecting together the data of linear spectroscopy and single-molecule spectroscopy (SMS) of PSI from Arthrospira platensis, we performed quantum modeling of the optical response based on molecular exciton theory (ET) and the multimode Brownian oscillator model (MBOM). Applying MBOM, the spectra of the red antenna state were calculated considering a particular for each red state adjustment of the low-frequency vibronic modes. Within the framework of our PSI exciton model it was shown that the coupling energy between antenna chlorophylls cannot be a factor of the red states formation, thus the long-wavelength bands are calculated without attribution to so-called antenna red chlorophylls. By the fitting of Huang-Rhys factors and frequencies for the lowest vibronic modes, we were able to reproduce the effects of strong and weak electron-phonon coupling experimentally observed in SMS spectra of red antenna states. Based on our theoretical calculations and also analysis of existing crystal structures of cyanobacterial PSI, we assumed that long-wavelength Chls can be localized in the peripheral protein subunits containing one or two pigment molecules.

Indexed as

Energy TransferChlorophyllPhotosystem I Protein ComplexProtein MultimerizationProtein SubunitsSpirulinaChlorophyllPhotosystem I Protein ComplexProtein SubunitsAbsorptionEnergy transferLong-wavelength statesMultimode Brownian oscillator modelPhotosystem IPSI monomerPSI trimerSingle-molecule fluorescence spectroscopy

Identifiers

PMID32766996
OpenAlexW3047974633

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.