Evidence map›Paper›PMID 32766242›Full record

ArticleFrontiers in cell and developmental biology2020

Association Study of Genetic Variants in Autophagy Pathway and Risk of Non-syndromic Cleft Lip With or Without Cleft Palate.

Shu Lou, Lan Ma, Shiyi Kan, Xin Yu, Yuting Wang, Fan Yang, Guirong Zhu, Liwen Fan, Dandan Li, Hua Wang and 4 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Skeletal Class III Malocclusion Is Associated withInternational journal of molecular sciences · 2022
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Shu LouJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Lan MaJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Shiyi KanJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Xin YuJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Yuting WangJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Fan YangJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Guirong ZhuJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Liwen FanJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Dandan LiJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Hua WangJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Wei WangJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Weibing ZhangJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Lin WangJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Yongchu PanJiangsu Key Laboratory of Oral Diseases, Nanjing Medical University, Nanjing, China.
Nanjing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although genetic variants in autophagy pathway genes were associated with the risk of oral cancers and early development in embryos, their associations with non-syndromic cleft lip with or without cleft palate (NSCL/P) risk remained unclear. A two-stage case-control study (2,027 NSCL/P cases and 1,843 controls) was performed to investigate the associations between single nucleotide polymorphisms (SNPs) in 23 autophagy pathway genes and NSCL/P susceptibility. The logistic regression model was used to calculate effects of SNPs on NSCL/P susceptibility. Gene-based analysis was performed via the sequence kernel association test (SKAT) and multi-marker analysis of genomic annotation (MAGMA) methods. Expression quantitative trait loci (eQTL) analysis was conducted using NSCL/P lip tissue samples. Gene expression during embryonic development was evaluated using RNA-Seq. Functional roles were explored by luciferase activity assay, cell apoptosis, proliferation, and cycle

Indexed as

autophagyHIF1Amolecular geneticsnon-syndromic cleft lip with or without cleft palatesingle nucleotide polymorphism

Identifiers

PMID32766242
PMCPMC7381156
OpenAlexW3043843738

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.