Evidence map›Paper›PMID 32764138›Full record

ArticleJournal of the American Society of Nephrology : JASN2020

Domain-Specific Antibodies Reveal Differences in the Membrane Topologies of Apolipoprotein L1 in Serum and Podocytes.

Nidhi Gupta, Xinhua Wang, Xiaohui Wen, Paul Moran, Maciej Paluch, Philip E Hass, Amy Heidersbach, Benjamin Haley, Daniel Kirchhofer, Randall J Brezski and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 29 citations in OpenAlex.

  1. Apolipoproteins L involvement in immunity.Journal of human immunity · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. A novelRenal failure · 2025
    Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Apolipoprotein L1 (APOL1) cation current in HEK-293 cells and in human podocytes.Pflugers Archiv : European journal of physiology · 2023
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Apolipoprotein L1 and mechanisms of kidney disease susceptibility.Current opinion in nephrology and hypertension · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Nidhi GuptaDepartment of Molecular Biology, Genentech, South San Francisco, California.
Xinhua WangDepartment of Antibody Engineering, Genentech, South San Francisco, California.
Xiaohui WenDepartment of Molecular Biology, Genentech, South San Francisco, California.
Paul MoranDepartment of Early Discovery Biochemistry, Genentech, South San Francisco, California.
Maciej PaluchDepartment of Protein Chemistry, Genentech, South San Francisco, California.
Philip E HassDepartment of Protein Chemistry, Genentech, South San Francisco, California.
Amy HeidersbachDepartment of Molecular Biology, Genentech, South San Francisco, California.
Benjamin HaleyDepartment of Molecular Biology, Genentech, South San Francisco, California.
Daniel KirchhoferDepartment of Early Discovery Biochemistry, Genentech, South San Francisco, California.
Randall J BrezskiDepartment of Antibody Engineering, Genentech, South San Francisco, California.
Andrew S PetersonDepartment of Molecular Biology, Genentech, South San Francisco, California.
Suzie J ScalesDepartment of Molecular Biology, Genentech, South San Francisco, California sscales@gene.com.ORCID 0000-0003-2544-0283

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCirculating APOL1 lyses trypanosomes, protecting against human sleeping sickness. Two common African gene variants of

methodsAPOL1 topology in serum (HDL particles) and in kidney podocytes was mapped with flow cytometry, immunoprecipitation, and trypanolysis assays that tracked 170 APOL1 domain-specific monoclonal antibodies.

resultsAPOL1 localizes to the surface of podocytes, with most of the pore-forming domain (PFD) and C terminus of the Serum Resistance Associated-interacting domain (SRA-ID), but not the membrane-addressing domain (MAD), being exposed. In contrast, differential trypanolytic blocking activity reveals that the MAD is exposed in serum APOL1, with less of the PFD accessible. Low pH did not detectably alter the gross topology of APOL1, as determined by antibody accessibility, in serum or on podocytes.

conclusionsOur antibodies highlighted different conformations of native APOL1 topology in serum (HDL particles) and at the podocyte surface. Our findings support the surface ion channel model for APOL1 risk variant-mediated podocyte injury, as well as providing domain accessibility information for designing APOL1-targeted therapeutics.

Indexed as

AnimalsAntibodiesAntibody SpecificityApolipoprotein L1Cell MembraneCHO CellsCricetulusHumansHydrogen-Ion ConcentrationPodocytesProtein DomainsAntibodiesApolipoprotein L1anti-ApoL1 monoclonal antibodiesApolipoprotein L1chronic kidney diseasepodocytetopologytrypanosomes

Identifiers

PMID32764138
PMCPMC7461681
OpenAlexW3047691613

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.