Evidence map›Paper›PMID 32761908›Full record

ArticleJournal of medical virology2021

The arrival and spread of SARS-CoV-2 in Colombia.

Juan David Ramírez, Carolina Florez, Marina Muñoz, Carolina Hernández, Adriana Castillo, Sergio Gomez, Angelica Rico, Lisseth Pardo, Esther C Barros, Sergio Castañeda and 14 more

Abstract read
In one paragraph

Article in Journal of medical virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

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  13. SARS-CoV-2 in Transit: Characterization of SARS-CoV-2 Genomes From Venezuelan Migrants in Colombia.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2021
    Article
  14. Article
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  16. Article
  17. Characterizing SARS-CoV-2 genome diversity circulating in South American countries: Signatures of potentially emergent lineages?International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2021
    Article
  18. Article
  19. Article
  20. The arrival and spread of SARS-CoV-2 in Colombia.Journal of medical virology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Juan David RamírezGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.ORCID 0000-0002-1344-9312
Carolina FlorezInstituto Nacional de Salud, Bogotá, Colombia.
Marina MuñozGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.
Carolina HernándezGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.
Adriana CastilloGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.
Sergio GomezInstituto Nacional de Salud, Bogotá, Colombia.
Angelica RicoInstituto Nacional de Salud, Bogotá, Colombia.
Lisseth PardoInstituto Nacional de Salud, Bogotá, Colombia.
Esther C BarrosInstituto Nacional de Salud, Bogotá, Colombia.
Sergio CastañedaGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.
Nathalia BallesterosGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.
David MartínezGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.
Laura VegaGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.
Jesús E JaimesGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.
Lissa Cruz-SaavedraGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.
Giovanny HerreraGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.
Luz H PatiñoGrupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia.
Aníbal A TeheránFundación Juan N Corpas, Bogotá, Colombia.
Ana S Gonzalez-ReicheIcahn School of Medicine at Mount Sinai, New York, New York.
Matthew M HernandezIcahn School of Medicine at Mount Sinai, New York, New York.
Emilia Mia SordilloIcahn School of Medicine at Mount Sinai, New York, New York.
Viviana SimonIcahn School of Medicine at Mount Sinai, New York, New York.
Harm van BakelIcahn School of Medicine at Mount Sinai, New York, New York.
Alberto Paniz-MondolfiIcahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-1259-1736

Funding

Universidad del Rosario Internal funds
6 · The paper itself

Abstract

We performed phylogenomic analysis of severe acute respiratory syndrome coronavirus-2 from 88 infected individuals across different regions of Colombia. Eleven different lineages were detected, suggesting multiple introduction events. Pangolin lineages B.1 and B.1.5 were the most frequent, with B.1 being associated with prior travel to high-risk areas.

Indexed as

Genetic VariationGenome, ViralPhylogenyAdultColombiaCOVID-19FemaleGeographyHumansMaleMiddle AgedRNA, ViralSARS-CoV-2TravelRNA, ViralB.1ColombiaCOVID-19lineageSARS-CoV-2

Identifiers

PMID32761908
PMCPMC7436700

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.