Evidence map›Paper›PMID 32761436›Full record

ArticleRice (New York, N.Y.)2020

Chloroplast SRP54s are Essential for Chloroplast Development in Rice.

Yongfeng Shi, Yan He, Xiangguang Lv, Yanlin Wei, Xiaobo Zhang, Xia Xu, Liangjian Li, Jian-Li Wu

Open access · goldAbstract read
In one paragraph

Article in Rice (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yongfeng ShiState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Yan HeState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Xiangguang LvState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Yanlin WeiState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Xiaobo ZhangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Xia XuState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Liangjian LiState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Jian-Li WuState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China. beishangd@163.com.ORCID http://orcid.org/0000-0003-3480-1503
China National Rice Research Institute · CNChinese Academy of Agricultural Sciences · CN

Funding

State Key Laboratory of Rice Biology 2017ZZKT10106
6 · The paper itself

Abstract

backgroundThe chloroplast signal recognition particle 54 (cpSRP54) is known for targeting the light-harvesting complex proteins to thylakoids and plays a critical role for chloroplast development in Arabidopsis, but little is known in rice. Here, we reported two homologous cpSRP54s that affect chloroplast development and plant survival in rice.

resultsTwo rice cpSRP54 homologues, OscpSRP54a and OscpSRP54b, were identified in present study. The defective OscpSRP54a (LOC_Os11g05552) was responsible for the pale green leaf phenotype of the viable pale green leaf 14 (pgl14) mutant. A single nucleotide substitution from G to A at the position 278, the first intron splicing site, was detected in LOC_Os11g05552 in pgl14. The wild type allele could rescue the mutant phenotype. Knockout lines of OscpSRP54b (LOC_Os11g05556) exhibited similar pale green phenotype to pgl14 with reduced chlorophyll contents and impaired chloroplast development, but showed apparently arrested-growth and died within 3 weeks. Both OscpSRP54a and OscpSRP54b were constitutively expressed mainly in shoots and leaves at the vegetative growth stage. Subcellular location indicated that both OscpSRP54a and OscpSRP54b were chloroplast-localized. Both OscpSRP54a and OscpSRP54b were able to interact with OscpSRP43, respectively. The transcript level of OscpSRP43 was significantly reduced while the transcript level of OscpSRP54b was apparently increased in pgl14. In contrast, the transcript levels of OscpSRP54a, OscpSRP43 and OscpSRP54b were all significantly decreased in OscpSRP54b knockout lines.

conclusionOur study demonstrated that both OscpSRP54a and OscpSRP54b were essential for normal chloroplast development by interacting with OscpSRP43 in rice. OscpSRP54a and OscpSRP54b might play distinct roles in transporting different chloroplast proteins into thylakoids through cpSRP-mediated pathway.

Indexed as

ChloroplastMap-based cloningPale green leafRiceSignal recognition particle

Identifiers

PMID32761436
PMCPMC7410889
OpenAlexW3048030203

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.