Evidence map›Paper›PMID 32760000›Full record

ArticleNature2020

The tuatara genome reveals ancient features of amniote evolution.

Neil J Gemmell, Kim Rutherford, Stefan Prost, Marc Tollis, David Winter, J Robert Macey, David L Adelson, Alexander Suh, Terry Bertozzi, José H Grau and 53 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Nature, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
34.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 202 citations in OpenAlex.

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15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

63 authors at 20 institutions in 12 countries.

Neil J GemmellDepartment of Anatomy, University of Otago, Dunedin, New Zealand. neil.gemmell@otago.ac.nz.ORCID http://orcid.org/0000-0003-0671-3637
Kim RutherfordDepartment of Anatomy, University of Otago, Dunedin, New Zealand.ORCID http://orcid.org/0000-0001-6277-726X
Stefan ProstLOEWE-Center for Translational Biodiversity Genomics, Senckenberg Museum, Frankfurt, Germany.ORCID http://orcid.org/0000-0002-6229-3596
Marc TollisSchool of Life Sciences, Arizona State University, Tempe, AZ, USA.
David WinterSchool of Fundamental Sciences, Massey University, Palmerston North, New Zealand.
J Robert MaceyPeralta Genomics Institute, Oakland, CA, USA.
David L AdelsonSchool of Biological Sciences, The University of Adelaide, Adelaide, South Australia, Australia.ORCID http://orcid.org/0000-0003-2404-5636
Alexander SuhDepartment of Ecology and Genetics - Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, Uppsala, Sweden.ORCID http://orcid.org/0000-0002-8979-9992
Terry BertozziSchool of Biological Sciences, The University of Adelaide, Adelaide, South Australia, Australia.ORCID http://orcid.org/0000-0001-6665-3395
José H GrauAmedes Genetics, Amedes Medizinische Dienstleistungen, Berlin, Germany.
Chris OrganDepartment of Earth Sciences, Montana State University, Bozeman, MT, USA.
Paul P GardnerDepartment of Biochemistry, University of Otago, Dunedin, New Zealand.
Matthieu MuffatoEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.
Mateus PatricioEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.
Konstantinos BillisEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.ORCID http://orcid.org/0000-0001-8568-4306
Fergal J MartinEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.ORCID http://orcid.org/0000-0002-1672-050X
Paul FlicekEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.ORCID http://orcid.org/0000-0002-3897-7955
Bent PetersenSection for Evolutionary Genomics, The GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0002-2472-8317
Lin KangEdward Via College of Osteopathic Medicine, Blacksburg, VA, USA.
Pawel MichalakEdward Via College of Osteopathic Medicine, Blacksburg, VA, USA.
Thomas R BuckleyManaaki Whenua - Landcare Research, Auckland, New Zealand.ORCID http://orcid.org/0000-0002-3076-4234
Melissa WilsonSchool of Life Sciences, Arizona State University, Tempe, AZ, USA.
Yuanyuan ChengSchool of Life and Environmental Sciences, The University of Sydney, Sydney, New South Wales, Australia.
Hilary MillerBiomatters, Auckland, New Zealand.
Ryan K SchottDepartment of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA.ORCID http://orcid.org/0000-0002-4015-3955
Melissa D JordanThe New Zealand Institute for Plant and Food Research, Auckland, New Zealand.ORCID http://orcid.org/0000-0002-6267-3644
Richard D NewcombThe New Zealand Institute for Plant and Food Research, Auckland, New Zealand.
José Ignacio ArroyoDepartamento de Ecología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile.
Nicole ValenzuelaDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA.ORCID http://orcid.org/0000-0003-1148-631X
Tim A HoreDepartment of Anatomy, University of Otago, Dunedin, New Zealand.
Jaime RenartInstituto de Investigaciones Biomédicas 'Alberto Sols' CSIC-UAM, Madrid, Spain.ORCID http://orcid.org/0000-0001-6620-3706
Valentina PeonaDepartment of Ecology and Genetics - Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, Uppsala, Sweden.
Claire R PeartDepartment of Ecology and Genetics - Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, Uppsala, Sweden.ORCID http://orcid.org/0000-0002-0433-0299
Vera M WarmuthDepartment of Ecology and Genetics - Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, Uppsala, Sweden.
Lu ZengSchool of Biological Sciences, The University of Adelaide, Adelaide, South Australia, Australia.
R Daniel KortschakSchool of Biological Sciences, The University of Adelaide, Adelaide, South Australia, Australia.ORCID http://orcid.org/0000-0001-8295-2301
Joy M RaisonSchool of Biological Sciences, The University of Adelaide, Adelaide, South Australia, Australia.
Valeria Velásquez ZapataDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA.ORCID http://orcid.org/0000-0002-2756-2156
Zhiqiang WuDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA.
Didac SantesmassesCentre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, Universitat Pompeu Fabra (UPF), Barcelona, Spain.ORCID http://orcid.org/0000-0003-3398-8943
Marco MariottiCentre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, Universitat Pompeu Fabra (UPF), Barcelona, Spain.
Roderic GuigóCentre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, Universitat Pompeu Fabra (UPF), Barcelona, Spain.
Shawn M RuppSchool of Life Sciences, Arizona State University, Tempe, AZ, USA.
Victoria G TwortManaaki Whenua - Landcare Research, Auckland, New Zealand.ORCID http://orcid.org/0000-0002-5581-4154
Nicolas DussexDepartment of Anatomy, University of Otago, Dunedin, New Zealand.ORCID http://orcid.org/0000-0002-9179-8593
Helen TaylorDepartment of Anatomy, University of Otago, Dunedin, New Zealand.
Hideaki AbeDepartment of Anatomy, University of Otago, Dunedin, New Zealand.
Donna M BondDepartment of Anatomy, University of Otago, Dunedin, New Zealand.
James M PatersonSchool of Biological Sciences, University of Canterbury, Christchurch, New Zealand.
Daniel G MulcahyGlobal Genome Initiative, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA.ORCID http://orcid.org/0000-0001-6614-2405
Vanessa L GonzalezGlobal Genome Initiative, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA.
Charles G BarbieriPeralta Genomics Institute, Oakland, CA, USA.
Dustin P DeMeoPeralta Genomics Institute, Oakland, CA, USA.
Stephan PabingerAustrian Institute of Technology (AIT), Center for Health and Bioresources, Molecular Diagnostics, Vienna, Austria.
Tracey Van StijnAgResearch, Invermay Agricultural Centre, Mosgiel, New Zealand.
Shannon ClarkeAgResearch, Invermay Agricultural Centre, Mosgiel, New Zealand.ORCID http://orcid.org/0000-0002-4615-8917
Oliver RyderSan Diego Zoo Institute for Conservation Research, Escondido, CA, USA.ORCID http://orcid.org/0000-0003-2427-763X
Scott V EdwardsDepartment of Organismic and Evolutionary Biology and the Museum of Comparative Zoology, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0003-2535-6217
Steven L SalzbergDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Lindsay AndersonSchool of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand.
Nicola NelsonSchool of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand.
Clive StoneNgatiwai Trust Board, Whangarei, New Zealand.
Ngatiwai Trust Board
University of Otago · NZEuropean Bioinformatics Institute · GBNgātiwai Trust Board · NZThe University of Adelaide · AUUppsala University · SEIowa State University · USPeralta Community College District · USSmithsonian Institution · USUniversitat Pompeu Fabra · ESAgResearch · NZArizona State University · USPlant & Food Research · NZUniversity of Auckland · NZVictoria University of Wellington · NZAuckland UniServices (New Zealand) · NZAustrian Institute of Technology · ATEdward Via College of Osteopathic Medicine · USHarvard University · USInstituto de Investigaciones Biomédicas Sols-Morreale · ESJohns Hopkins University · US

Funding

Computational Methods for Genome Assembly, Transcript Assembly, and Variant DiscoveryR01HG006677 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI SALZBERG, STEVEN L. · 2011 to 2025
$10.7M
Population dynamics and medical consequences of sex chromosome evolutionR35GM124827 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI WILSON, MELISSA A · 2017 to 2024
$2.7M
NHGRI NIH HHS R01 HG006677NIGMS NIH HHS R35 GM124827Wellcome Trust 108749Wellcome Trust WT108749/Z/15/Z
6 · The paper itself

Abstract

The tuatara (Sphenodon punctatus)-the only living member of the reptilian order Rhynchocephalia (Sphenodontia), once widespread across Gondwana

Indexed as

Evolution, MolecularPhylogenyAnimalsConservation of Natural ResourcesFemaleGenetics, PopulationGenomeLizardsMaleMolecular Sequence AnnotationNew ZealandReptilesSex CharacteristicsSnakesSynteny

Identifiers

PMID32760000
PMCPMC7116210
OpenAlexW3047173106

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.