Evidence map›Paper›PMID 32759323›Full record

ArticleJournal of virology2020

Drug Resistance Mutation Frequency of Single-Genome Amplification-Derived HIV-1 Polymerase Genomes in the Cerebrospinal Fluid and Plasma of HIV-1-Infected Individuals under Nonsuppressive Therapy.

Leslie St Bernard, Jeremy Abolade, Hiroshi Mohri, Martin Markowitz, Teresa H Evering

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Trial
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Leslie St BernardAaron Diamond AIDS Research Center, an affiliate of the Rockefeller University, New York, New York, USA.
Jeremy AboladeAaron Diamond AIDS Research Center, an affiliate of the Rockefeller University, New York, New York, USA.
Hiroshi MohriAaron Diamond AIDS Research Center, an affiliate of the Rockefeller University, New York, New York, USA.
Martin MarkowitzAaron Diamond AIDS Research Center, an affiliate of the Rockefeller University, New York, New York, USA.
Teresa H EveringAaron Diamond AIDS Research Center, an affiliate of the Rockefeller University, New York, New York, USA evering@med.cornell.edu.ORCID 0000-0002-5707-9317
Aaron Diamond AIDS Research Center · US

Funding

The Role of HIV-1 Evolution in NeuroadaptationK08MH090900 · NIMH · AARON DIAMOND AIDS RESEARCH CENTER · PI EVERING, TERESA · 2010 to 2014
$950k
CNS HIV ANTI-RETROVIRAL THERAPY EFFECTS RESEARCH /CHARTER/ -278022005-278022005N01MH022005 · NIMH · UNIVERSITY OF CA -SAN DIEGO · PI GRANT, IGOR · 2003 to 2006
–
NIMH NIH HHS K08 MH090900NIMH NIH HHS N01 MH022005
6 · The paper itself

Abstract

HIV-1 evolution in the cerebrospinal fluid (CSF) and plasma may result in discordant drug resistance mutations (DRMs) in the compartments. Single-genome amplification (SGA) was used to generate partial HIV-1 polymerase genomes in paired CSF and plasma samples from 12 HIV-1-positive participants in the CNS HIV Antiretroviral Therapy Effects Research (CHARTER) study who were classified as neurocognitively unimpaired or with various degrees of HIV-associated neurocognitive disorders (HAND). Subjects were viremic on combination antiretroviral therapy (cART). HIV-1 DRMs and phylogenetic characteristics were determined using the Stanford HIVdb program and phylogenetic analyses. Individual DRMs were identified more frequently in plasma than in paired CSF (

Indexed as

Drug Resistance, ViralGenome, ViralHIV-1HIV InfectionsMutation RateAdultAnti-Retroviral AgentsFemaleHumansMaleMiddle AgedAnti-Retroviral Agentscerebrospinal fluid (CSF)compartmentalizationdrug resistance mutation (DRM)HIV-1 polymeraseHIV-associated neurocognitive disorders (HAND)single-genome amplification (SGA)

Identifiers

PMID32759323
PMCPMC7527065
OpenAlexW3048360805

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.