Evidence map›Paper›PMID 32759207›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Revealing the origin of multiphasic dynamic behaviors in cyanobacteriochrome.

Dihao Wang, Xiankun Li, Sheng Zhang, Lijuan Wang, Xiaojing Yang, Dongping Zhong

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Cyanobacteriochromes: A Rainbow of Photoreceptors.Annual review of microbiology · 2024
    Review
  3. Article
  4. Light- and pH-dependent structural changes in cyanobacteriochrome AnPixJg2.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dihao WangDepartment of Physics, The Ohio State University, Columbus, OH 43210.ORCID 0000-0002-3866-0077
Xiankun LiDepartment of Physics, The Ohio State University, Columbus, OH 43210.
Sheng ZhangDepartment of Physics, The Ohio State University, Columbus, OH 43210.
Lijuan WangDepartment of Physics, The Ohio State University, Columbus, OH 43210.
Xiaojing YangDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607.ORCID 0000-0003-1394-9189
Dongping ZhongDepartment of Physics, The Ohio State University, Columbus, OH 43210; zhong.28@osu.edu.ORCID 0000-0001-9381-8992

Funding

Structures, Dynamics and Signaling Mechanisms of Modular PhotoreceptorsR01EY024363 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI YANG, XIAOJING · 2014 to 2021
$2.9M
Ultrafast Biological Dynamics for Protein Properties and FunctionsR35GM118332 · NIGMS · OHIO STATE UNIVERSITY · PI ZHONG, DONGPING · 2016 to 2020
$2.1M
NEI NIH HHS R01 EY024363NIGMS NIH HHS R35 GM118332
6 · The paper itself

Abstract

Cyanobacteriochromes are photoreceptors in cyanobacteria that exhibit a wide spectral coverage and unique photophysical properties from the photoinduced isomerization of a linear tetrapyrrole chromophore. Here, we integrate femtosecond-resolved fluorescence and transient-absorption methods and unambiguously showed the significant solvation dynamics occurring at the active site from a few to hundreds of picoseconds. These motions of local water molecules and polar side chains are continuously convoluted with the isomerization reaction, leading to a nonequilibrium processes with continuous active-site motions. By mutations of critical residues at the active site, the modified local structures become looser, resulting in faster solvation relaxations and isomerization reaction. The observation of solvation dynamics is significant and critical to the correct interpretation of often-observed multiphasic dynamic behaviors, and thus the previously invoked ground-state heterogeneity may not be relevant to the excited-state isomerization reaction.

Indexed as

Bacterial ProteinsCatalytic DomainCyanobacteriaIsomerismKineticsPhotoreceptors, MicrobialBacterial ProteinsPhotoreceptors, Microbialactive-site relaxationconical intersectiondouble-bond twistingfemtosecond spectroscopysite-directed mutation

Identifiers

PMID32759207
PMCPMC7443970

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.