Evidence map›Paper›PMID 32757146›Full record

ArticleVirologica Sinica2021

Human Cytomegalovirus Influences Host circRNA Transcriptions during Productive Infection.

Jingui Deng, Yujing Huang, Qing Wang, Jianming Li, Yanping Ma, Ying Qi, Zhongyang Liu, Yibo Li, Qiang Ruan

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Virologica Sinica, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Identification and characterization of human cytomegalovirus-encoded circular RNAs.Frontiers in cellular and infection microbiology · 2022
    Article
  9. Differential host circRNA expression profiles in human lung epithelial cells infected with SARS-CoV-2.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2021
    Article
  10. The Fate of Speckled Protein 100 (Sp100) During Herpesviruses Infection.Frontiers in cellular and infection microbiology · 2020
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jingui DengVirology Laboratory, The Affiliated Shengjing Hospital, China Medical University, Shenyang, 110004, China.
Yujing HuangVirology Laboratory, The Affiliated Shengjing Hospital, China Medical University, Shenyang, 110004, China. huangyj@sj-hospital.org.ORCID http://orcid.org/0000-0001-8292-8002
Qing WangVirology Laboratory, The Affiliated Shengjing Hospital, China Medical University, Shenyang, 110004, China.
Jianming LiVirology Laboratory, The Affiliated Shengjing Hospital, China Medical University, Shenyang, 110004, China.
Yanping MaVirology Laboratory, The Affiliated Shengjing Hospital, China Medical University, Shenyang, 110004, China.
Ying QiVirology Laboratory, The Affiliated Shengjing Hospital, China Medical University, Shenyang, 110004, China.
Zhongyang LiuVirology Laboratory, The Affiliated Shengjing Hospital, China Medical University, Shenyang, 110004, China.
Yibo LiDepartment of Gynecology and Obstetrics, The Affiliated Shengjing Hospital, China Medical University, Shenyang, 110004, China.
Qiang RuanVirology Laboratory, The Affiliated Shengjing Hospital, China Medical University, Shenyang, 110004, China. ruanq@sj-hospital.org.ORCID http://orcid.org/0000-0003-4014-4116
China Medical University · CNCentral Hospital Affiliated to Shenyang Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human cytomegalovirus (HCMV) is a double-strand DNA virus widely infected in human. Circular RNAs (circRNAs) are non-coding RNAs with most functions of which keep unknown, and the effects of HCMV productive infection on host circRNA transcriptions remain unclear. In this study, we profiled 283 host circRNAs that significantly altered by HCMV productive infection in human embryonic lung fibroblasts (HELF) by RNA deep sequencing and bioinformatics analysis. Among these, circSP100, circMAP3K1, circPLEKHM1, and circTRIO were validated for their transcriptions and sequences. Furthermore, characteristics of circSP100 were investigated by RT-qPCR and northern blot. It was implied that circSP100 was produced from the sense strand of the SP100 gene containing six exons. Kinetics of circSP100 and SP100 mRNA were significantly different after infection: circSP100 levels increased gradually along with infection, whereas SP100 mRNA levels increased in the beginning and dropped at 24 h post-infection (hpi). Meanwhile, a total number of 257 proteins, including 10 HCMV encoding proteins, were identified potentially binding to cytoplasmic circSP100 by RNA antisense purification (RAP) and mass spectrometry. Enrichment analysis showed these proteins were mainly involved in the spliceosome, protein processing, ribosome, and phagosome pathways, suggesting multiple functions of circSP100 during HCMV infection.

Indexed as

Cytomegalovirus InfectionsRNA, CircularCytomegalovirusHumansInfantRNA, MessengerRNA, CircularRNA, MessengercircSP100Circular RNA (circRNA)Human cytomegalovirus (HCMV)Productive infectionTranscription

Identifiers

PMID32757146
PMCPMC8087738
OpenAlexW3047347035

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.