Evidence map›Paper›PMID 32756609›Full record

ArticlePloS one2020

Molecular profiling of non-small cell lung cancer.

Marika L Forsythe, Akram Alwithenani, Drew Bethune, Mathieu Castonguay, Arik Drucker, Gordon Flowerdew, Daniel French, John Fris, Wenda Greer, Harry Henteleff and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.1field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 2 citations in OpenAlex.

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  10. EGFR-Targeted Therapies: A Literature Review.Journal of clinical medicine · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 1 institution in 2 countries.

Marika L ForsytheDepartment of Pathology, Faculty of Medicine, Dalhousie University Halifax, Halifax, Nova Scotia, Canada.
Akram AlwithenaniDepartment of Pathology, Faculty of Medicine, Dalhousie University Halifax, Halifax, Nova Scotia, Canada.
Drew BethuneDepartment of Surgery, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.
Mathieu CastonguayDepartment of Pathology, Faculty of Medicine, Dalhousie University Halifax, Halifax, Nova Scotia, Canada.
Arik DruckerDivision of Medical Oncology, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.ORCID 0000-0002-3551-8673
Gordon FlowerdewDepartment of Epidemiology, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.
Daniel FrenchDepartment of Surgery, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.
John FrisDepartment of Pathology, Faculty of Medicine, Dalhousie University Halifax, Halifax, Nova Scotia, Canada.
Wenda GreerDepartment of Pathology, Faculty of Medicine, Dalhousie University Halifax, Halifax, Nova Scotia, Canada.
Harry HenteleffDepartment of Surgery, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.
Mary MacNeilDivision of Medical Oncology, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.
Paola MarignaniDepartment of Biochemistry and Molecular Biology, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.
Wojciech MorzyckiDivision of Medical Oncology, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.
Madelaine PlourdeDepartment of Surgery, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.
Stephanie SnowDivision of Medical Oncology, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.
Zhaolin XuDepartment of Pathology, Faculty of Medicine, Dalhousie University Halifax, Halifax, Nova Scotia, Canada.ORCID 0000-0002-8553-4081
Dalhousie University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lung cancer is generally treated with conventional therapies, including chemotherapy and radiation. These methods, however, are not specific to cancer cells and instead attack every cell present, including normal cells. Personalized therapies provide more efficient treatment options as they target the individual's genetic makeup. The goal of this study was to identify the frequency of causal genetic mutations across a variety of lung cancer subtypes in the earlier stages. 833 samples of non-small cell lung cancer from 799 patients who received resection of their lung cancer, were selected for molecular analysis of six known mutations, including EGFR, KRAS, BRAF, PIK3CA, HER2 and ALK. A SNaPshot assay was used for point mutations and fragment analysis searched for insertions and deletions. ALK was evaluated by IHC +/- FISH. Statistical analysis was performed to determine correlations between molecular and clinical/pathological patient data. None of the tested variants were identified in most (66.15%) of cases. The observed frequencies among the total samples vs. only the adenocarcinoma cases were notable different, with the highest frequency being the KRAS mutation (24.49% vs. 35.55%), followed by EGFR (6.96% vs. 10.23%), PIK3CA (1.20% vs. 0.9%), BRAF (1.08% vs. 1.62%), ALK (0.12% vs. 0.18%), while the lowest was the HER2 mutation (0% for both). The statistical analysis yielded correlations between presence of a mutation with gender, cancer type, vascular invasion and smoking history. The outcome of this study will provide data that helps stratify patient prognosis and supports development of more precise treatments, resulting in improved outcomes for future lung cancer patients.

Indexed as

Genetic Predisposition to DiseasePrognosisAdenocarcinomaAdultAgedAged, 80 and overAnaplastic Lymphoma KinaseCarcinoma, Non-Small-Cell LungClass I Phosphatidylinositol 3-KinasesErb-b2 Receptor Tyrosine KinasesErbB ReceptorsFemaleHumansMaleMiddle AgedMutationALK protein, humanAnaplastic Lymphoma KinaseBRAF protein, humanClass I Phosphatidylinositol 3-KinasesEGFR protein, humanERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesErbB ReceptorsKRAS protein, humanPIK3CA protein, humanProto-Oncogene Proteins B-rafProto-Oncogene Proteins p21(ras)

Identifiers

PMID32756609
PMCPMC7406040
OpenAlexW2582067464

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.