Evidence map›Paper›PMID 32754757›Full record

ArticleDatabase : the journal of biological databases and curation2020

CerealsDB-new tools for the analysis of the wheat genome: update 2020.

Paul A Wilkinson, Alexandra M Allen, Simon Tyrrell, Luzie U Wingen, Xingdong Bian, Mark O Winfield, Amanda Burridge, Daniel S Shaw, Jan Zaucha, Simon Griffiths and 3 more

Open access · goldAbstract read
In one paragraph

Article in Database : the journal of biological databases and curation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

  1. BbGSD: Black-boned Sheep Genome SNP Database.Database : the journal of biological databases and curation · 2025
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. CerealsDB: A Whistle-Stop Tour of an Open Access SNP Resource.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  11. Review
  12. Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Paul A WilkinsonSchool of Biological Sciences, University of Bristol, Bristol Life Sciences Building, 24 Tyndall Avenue, Bristol, BS8 1TQ, UK.
Alexandra M AllenSchool of Biological Sciences, University of Bristol, Bristol Life Sciences Building, 24 Tyndall Avenue, Bristol, BS8 1TQ, UK.
Simon TyrrellEarlham Institute, Norwich Research Park, Norwich NR4 7UZ, UK.
Luzie U WingenJohn Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.
Xingdong BianEarlham Institute, Norwich Research Park, Norwich NR4 7UZ, UK.
Mark O WinfieldSchool of Biological Sciences, University of Bristol, Bristol Life Sciences Building, 24 Tyndall Avenue, Bristol, BS8 1TQ, UK.
Amanda BurridgeSchool of Biological Sciences, University of Bristol, Bristol Life Sciences Building, 24 Tyndall Avenue, Bristol, BS8 1TQ, UK.
Daniel S ShawSchool of Biological Sciences, University of Bristol, Bristol Life Sciences Building, 24 Tyndall Avenue, Bristol, BS8 1TQ, UK.
Jan ZauchaDepartment of Bioinformatics, Wissenschaftszentrum Weihenstephan, Technical University of Munich, 85354 Freising, Germany.
Simon GriffithsJohn Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.
Robert P DaveyEarlham Institute, Norwich Research Park, Norwich NR4 7UZ, UK.
Keith J EdwardsSchool of Biological Sciences, University of Bristol, Bristol Life Sciences Building, 24 Tyndall Avenue, Bristol, BS8 1TQ, UK.
Gary L A BarkerSchool of Biological Sciences, University of Bristol, Bristol Life Sciences Building, 24 Tyndall Avenue, Bristol, BS8 1TQ, UK.
University of Bristol · GBNorwich Research Park · GBJohn Innes Centre · GBTechnical University of Munich · DE

Funding

Biotechnology and Biological Sciences Research Council BBS/E/C/000I0210Biotechnology and Biological Sciences Research Council BBS/E/C/000I0280Biotechnology and Biological Sciences Research Council BBS/E/J/000PR9782Biotechnology and Biological Sciences Research Council BBS/E/T/000PR9783
6 · The paper itself

Abstract

CerealsDB (www.cerealsdb.uk.net) is an online repository of mainly hexaploid wheat (Triticum aestivum) single nucleotide polymorphisms (SNPs) and genotyping data. The CerealsDB website has been designed to enable wheat breeders and scientists to select the appropriate markers for research breeding tasks, such as marker-assisted selection. We report a large update of genotyping information for over 6000 wheat accessions and describe new webtools for exploring and visualizing the data. We also describe a new database of quantitative trait loci that links phenotypic traits to CerealsDB SNP markers and allelic scores for each of those markers. CerealsDB is an open-access website that hosts information on wheat SNPs considered useful for both plant breeders and research scientists. The latest CerealsDB database is available at https://www.cerealsdb.uk.net/cerealgenomics/CerealsDB/indexNEW.php.

Indexed as

Databases, GeneticSoftwareBreedingEdible GrainGenome, PlantPolymorphism, Single NucleotideQuantitative Trait LociTriticum

Identifiers

PMID32754757
PMCPMC7402920
OpenAlexW3047318016

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.