Evidence map›Paper›PMID 32754683›Full record

ArticleEpigenetics insights2020

Interweaving Between Genetic and Epigenetic Studies on Childhood Asthma.

Aniruddha Rathod, Jiasong Duan, Hongmei Zhang, John W Holloway, Susan Ewart, S Hasan Arshad, Wilfried Karmaus

Abstract read
In one paragraph

Article in Epigenetics insights, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. BMI trajectory in childhood is associated with asthma incidence at young adulthood mediated by DNA methylation.Allergy, asthma, and clinical immunology : official journal of the Canadian Society of Allergy and Clinical Immunology · 2021
    Article
  5. Sex-specific associations of asthma acquisition with changes in DNA methylation during adolescence.Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology · 2021
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Aniruddha RathodDivision of Epidemiology, Biostatistics, and Environmental Health Sciences, School of Public Health, The University of Memphis, Memphis, TN, USA.ORCID https://orcid.org/0000-0002-4921-0952
Jiasong DuanDivision of Epidemiology, Biostatistics, and Environmental Health Sciences, School of Public Health, The University of Memphis, Memphis, TN, USA.
Hongmei ZhangDivision of Epidemiology, Biostatistics, and Environmental Health Sciences, School of Public Health, The University of Memphis, Memphis, TN, USA.
John W HollowayClinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK.
Susan EwartCollege of Veterinary Medicine, Michigan State University, East Lansing, MI, USA.
S Hasan ArshadClinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK.
Wilfried KarmausDivision of Epidemiology, Biostatistics, and Environmental Health Sciences, School of Public Health, The University of Memphis, Memphis, TN, USA.

Funding

Does epigenetic methylation explain the gender-switch in adolescent asthma?R01AI121226 · NIAID · UNIVERSITY OF MEMPHIS · PI HOLLOWAY, JOHN W, ZHANG, HONGMEI · 2016 to 2020
$3.2M
Effect of Prenatal Compounds on Adult Lung Function via Neonatal DNA MethylationR01HL132321 · NHLBI · UNIVERSITY OF MEMPHIS · PI KARMAUS, WILFRIED JJ · 2016 to 2020
$3.2M
Genetic &epidemiologic cohort study of asthma &allergyR01AI061471 · NIAID · MICHIGAN STATE UNIVERSITY · PI EWART, SUSAN L · 2005 to 2009
$1.8M
NHLBI NIH HHS R01 HL132321NIAID NIH HHS R01 AI061471NIAID NIH HHS R01 AI121226
6 · The paper itself

Abstract

The cause and underlying mechanisms that contribute to asthma pathogenesis are not well known. Both genome- and epigenome-wide association studies have identified genes associated with asthma risk. It is unknown to what extent genes identified in these two types of studies overlap. Based on existing literature and the DisGeNET database, we extracted overlapping genes identified in genetic and epigenetic studies of childhood asthma. Through analyses of variance, we assessed whether DNA methylation (DNAm) at 5'-C-phosphate-G-3' (CpGs) on the overlapping genes was associated with neighboring single-nucleotide polymorphisms (SNPs) within 1M base pairs (bps) and with low linkage disequilibrium (

Indexed as

asthmaDNA methylationepigeneticGeneticmethQTLsSNPs

Identifiers

PMID32754683
PMCPMC7378715

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.