Evidence map›Paper›PMID 32754639›Full record

ArticleScience advances2020

Epigenetic transcriptional reprogramming by WT1 mediates a repair response during podocyte injury.

Sandrine Ettou, Youngsook L Jung, Tomoya Miyoshi, Dhawal Jain, Ken Hiratsuka, Valerie Schumacher, Mary E Taglienti, Ryuji Morizane, Peter J Park, Jordan A Kreidberg

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
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  5. Review
  6. Dissecting Normal and Abnormal Human Kidney Development Using Multiomics.Journal of the American Society of Nephrology : JASN · 2026
    Review
  7. Review
  8. Article
  9. Article
  10. Role of mZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2024
    Review
  11. Podocyte injury in extreme obesity.International journal of obesity (2005) · 2024
    Article
  12. Gene regulatory networks in disease and ageing.Nature reviews. Nephrology · 2024
    Review
  13. Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Sandrine EttouDepartment of Urology, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0002-2535-8661
Youngsook L JungDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0002-4736-6961
Tomoya MiyoshiNephrology Division, Massachusetts General Hospital, Boston, MA 02114, USA.ORCID 0000-0002-5777-1821
Dhawal JainDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0001-9437-7201
Ken HiratsukaNephrology Division, Massachusetts General Hospital, Boston, MA 02114, USA.
Valerie SchumacherDepartment of Urology, Boston Children's Hospital, Boston, MA 02115, USA.
Mary E TaglientiDepartment of Urology, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0002-0428-2717
Ryuji MorizaneNephrology Division, Massachusetts General Hospital, Boston, MA 02114, USA.ORCID 0000-0002-0377-5667
Peter J ParkDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0001-9378-960X
Jordan A KreidbergDepartment of Urology, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0002-9085-2420
Boston Children's Hospital · USBrigham and Women's Hospital · USHarvard University · US

Funding

Kidney Microphysiological Analysis Platforms (MAP) to Optimize Function and Model DiseaseUH3TR002155 · NCATS · BRIGHAM AND WOMEN'S HOSPITAL · PI BONVENTRE, JOSEPH VINCENT, LEE, LUKE P. · 2019 to 2021
$3.3M
Recreating Kidney Organogenesis in vitro with Human Pluripotent Stem CellsDP2DK133821 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI MORIZANE, RYUJI · 2019 to 2019
$2.5M
Vascularized kidney organoids on chip for efficacy and toxicity testing of somatic genome editingU01DK127587 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI LEWIS, JENNIFER A., MORIZANE, RYUJI · 2020 to 2022
$2.1M
Kidney Microphysiological Analysis Platforms (MAP) to Optimize Function and Model DiseaseUG3TR002155 · NCATS · BRIGHAM AND WOMEN'S HOSPITAL · PI BONVENTRE, JOSEPH VINCENT, LEE, LUKE P. · 2017 to 2018
$2.0M
Transcriptional Reprogramming in Podocyte InjuryR01DK109972 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI KREIDBERG, JORDAN A · 2016 to 2019
$1.8M
A role for mRNA transport and local translation in podocytesR01DK091299 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI SCHUMACHER, VALERIE A. · 2012 to 2016
$1.6M
Vascularized kidney organoids on chip for efficacy and toxicity testing of somatic genome editingU01EB028899 · NIBIB · MASSACHUSETTS GENERAL HOSPITAL · PI LEWIS, JENNIFER A., MORIZANE, RYUJI · 2019 to 2019
$748k
NCATS NIH HHS UG3 TR002155NCATS NIH HHS UH3 TR002155NIBIB NIH HHS U01 EB028899NIDDK NIH HHS DP2 DK133821NIDDK NIH HHS R01 DK091299NIDDK NIH HHS R01 DK109972NIDDK NIH HHS U01 DK127587
6 · The paper itself

Abstract

In the context of human disease, the mechanisms whereby transcription factors reprogram gene expression in reparative responses to injury are not well understood. We have studied the mechanisms of transcriptional reprogramming in disease using murine kidney podocytes as a model for tissue injury. Podocytes are a crucial component of glomeruli, the filtration units of each nephron. Podocyte injury is the initial event in many processes that lead to end-stage kidney disease. Wilms tumor-1 (WT1) is a master regulator of gene expression in podocytes, binding nearly all genes known to be crucial for maintenance of the glomerular filtration barrier. Using murine models and human kidney organoids, we investigated WT1-mediated transcriptional reprogramming during the course of podocyte injury. Reprogramming the transcriptome involved highly dynamic changes in the binding of WT1 to target genes during a reparative injury response, affecting chromatin state and expression levels of target genes.

Indexed as

PodocytesAnimalsEpigenesis, GeneticHumansKidneyMiceTranscription FactorsWT1 ProteinsTranscription FactorsWT1 protein, humanWT1 protein, mouseWT1 Proteins

Identifiers

PMID32754639
PMCPMC7380960
OpenAlexW3045445797

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.