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ArticleScientific reports2020

Transcriptomic profile of adverse neurodevelopmental outcomes after neonatal encephalopathy.

Paolo Montaldo, Aubrey Cunnington, Vania Oliveira, Ravi Swamy, Prathik Bandya, Stuti Pant, Peter J Lally, Phoebe Ivain, Josephine Mendoza, Gaurav Atreja and 25 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Inflammatory mechanisms contribute to long-term cognitive deficits induced by perinatal asphyxia via interleukin-1.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2026
    Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 9 institutions in 5 countries.

Paolo MontaldoDepartment of Brain Sciences, Centre for Perinatal Neuroscience, Imperial College London, London, UK. p.montaldo@imperial.ac.uk.
Aubrey CunningtonPaediatric Infectious Diseases, Department of Infectious Diseases, Imperial College London, London, UK.
Vania OliveiraDepartment of Brain Sciences, Centre for Perinatal Neuroscience, Imperial College London, London, UK.
Ravi SwamyDepartment of Brain Sciences, Centre for Perinatal Neuroscience, Imperial College London, London, UK.
Prathik BandyaNeonatal Medicine, Indira Gandhi Institute of Child Health, Bangalore, Karnataka, India.
Stuti PantDepartment of Brain Sciences, Centre for Perinatal Neuroscience, Imperial College London, London, UK.
Peter J LallyDepartment of Brain Sciences, Centre for Perinatal Neuroscience, Imperial College London, London, UK.
Phoebe IvainDepartment of Brain Sciences, Centre for Perinatal Neuroscience, Imperial College London, London, UK.
Josephine MendozaDepartment of Brain Sciences, Centre for Perinatal Neuroscience, Imperial College London, London, UK.
Gaurav AtrejaDepartment of Brain Sciences, Centre for Perinatal Neuroscience, Imperial College London, London, UK.
Vadakepat PadmeshNeonatal Medicine, Institute of Obstetrics and Gynaecology, Madras Medical College, Chennai, Tamil Nadu, India.
Mythili BaburajNeonatal Medicine, Institute of Obstetrics and Gynaecology, Madras Medical College, Chennai, Tamil Nadu, India.
Monica SebastianNeonatal Medicine, Institute of Child Health, Madras Medical College, Tamil Nadu, Chennai, India.
Indiramma YasashwiNeonatal Medicine, Indira Gandhi Institute of Child Health, Bangalore, Karnataka, India.
Chinnathambi KamalarathnamNeonatal Medicine, Institute of Obstetrics and Gynaecology, Madras Medical College, Chennai, Tamil Nadu, India.
Rema ChandramohanNeonatal Medicine, Institute of Obstetrics and Gynaecology, Madras Medical College, Chennai, Tamil Nadu, India.
Sundaram MangalabharathiNeonatal Medicine, Institute of Obstetrics and Gynaecology, Madras Medical College, Chennai, Tamil Nadu, India.
Kumutha KumaraswamiNeonatal Medicine, Institute of Obstetrics and Gynaecology, Madras Medical College, Chennai, Tamil Nadu, India.
Shobha KumarNeonatal Medicine, Institute of Obstetrics and Gynaecology, Madras Medical College, Chennai, Tamil Nadu, India.
Naveen BenakappaNeonatal Medicine, Indira Gandhi Institute of Child Health, Bangalore, Karnataka, India.
Swati ManerkarNeonatal Medicine, Sion Medical College, Mumbai, India.
Jayashree MondhkarNeonatal Medicine, Sion Medical College, Mumbai, India.
Vinayagam PrakashNeonatal Medicine, Institute of Obstetrics and Gynaecology, Madras Medical College, Chennai, Tamil Nadu, India.
Mohammed SajjidNeonatal Medicine, Institute of Obstetrics and Gynaecology, Madras Medical College, Chennai, Tamil Nadu, India.
Arasar SeeralarNeonatal Medicine, Institute of Child Health, Madras Medical College, Tamil Nadu, Chennai, India.
Ismat JahanNeonatal Medicine, Bangabandhu Sheikh Mujib Medical University, Dhaka, Bangladesh.
Sadeka Choudhury MoniNeonatal Medicine, Bangabandhu Sheikh Mujib Medical University, Dhaka, Bangladesh.
Mohammod ShahidullahNeonatal Medicine, Bangabandhu Sheikh Mujib Medical University, Dhaka, Bangladesh.
Radhika SujathaNeonatal Medicine, Government Medical College, Thiruvananthapuram, Kerala, India.
Manigandan ChandrasekaranDepartment of Brain Sciences, Centre for Perinatal Neuroscience, Imperial College London, London, UK.
Siddarth RamjiNeonatal Medicine, Maulana Azad Medical College, New Delhi, Delhi, India.
Seetha ShankaranNeonatal-Perinatal Medicine, Wayne State University, Detroit, MI, USA.
Myrsini Kaforou *Paediatric Infectious Diseases, Department of Infectious Diseases, Imperial College London, London, UK.
Jethro Herberg *Paediatric Infectious Diseases, Department of Infectious Diseases, Imperial College London, London, UK.
Sudhin Thayyil *Department of Brain Sciences, Centre for Perinatal Neuroscience, Imperial College London, London, UK.
Imperial College London · GBMadras Medical College · INBangabandhu Sheikh Mujib Medical University · BDIndira Gandhi Institute of Child Health · INInstitute of Child Health · INGovernment Medical College and Hospital · INMaulana Azad Medical College · INUniversity of Campania "Luigi Vanvitelli" · ITWayne State University · US

Funding

Department of Health ICA-CDRF-2016-02-071Department of Health NIHR300118Department of Health NIHR/CS/010/022Medical Research Council, UK MR/R001375/1Wellcome TrustWellcome Trust 206508/Z/17/Z
6 · The paper itself

Abstract

A rapid and early diagnostic test to identify the encephalopathic babies at risk of adverse outcome may accelerate the development of neuroprotectants. We examined if a whole blood transcriptomic signature measured soon after birth, predicts adverse neurodevelopmental outcome eighteen months after neonatal encephalopathy. We performed next generation sequencing on whole blood ribonucleic acid obtained within six hours of birth from the first 47 encephalopathic babies recruited to the Hypothermia for Encephalopathy in Low and middle-income countries (HELIX) trial. Two infants with blood culture positive sepsis were excluded, and the data from remaining 45 were analysed. A total of 855 genes were significantly differentially expressed between the good and adverse outcome groups, of which RGS1 and SMC4 were the most significant. Biological pathway analysis adjusted for gender, trial randomisation allocation (cooling therapy versus usual care) and estimated blood leukocyte proportions revealed over-representation of genes from pathways related to melatonin and polo-like kinase in babies with adverse outcome. These preliminary data suggest that transcriptomic profiling may be a promising tool for rapid risk stratification in neonatal encephalopathy. It may provide insights into biological mechanisms and identify novel therapeutic targets for neuroprotection.

Indexed as

Gene Expression ProfilingBrainBrain DiseasesFemaleHumansInfant, NewbornMale

Identifiers

PMID32753750
PMCPMC7403382
OpenAlexW3047550195

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.