Evidence map›Paper›PMID 32747783›Full record

ArticleNature structural & molecular biology2020

The nucleosome acidic patch and H2A ubiquitination underlie mSWI/SNF recruitment in synovial sarcoma.

Matthew J McBride, Nazar Mashtalir, Evan B Winter, Hai T Dao, Martin Filipovski, Andrew R D'Avino, Hyuk-Soo Seo, Neil T Umbreit, Roodolph St Pierre, Alfredo M Valencia and 6 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 67 citations in OpenAlex.

  1. Trial
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  4. Article
  5. Article
  6. Review
  7. BAF complex-independent gene activation by SS18::SSX.bioRxiv : the preprint server for biology · 2026
    Article
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  11. Review
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  18. Epigenetic Regulation Via Electrical Forces.Reviews of physiology, biochemistry and pharmacology · 2025
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Matthew J McBride *Department of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.
Nazar Mashtalir *Department of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.
Evan B WinterDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.
Hai T DaoDepartment of Chemistry, Princeton University, Princeton, NJ, USA.
Martin FilipovskiDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.
Andrew R D'AvinoDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.
Hyuk-Soo SeoDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0003-0646-2102
Neil T UmbreitDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0001-6147-9009
Roodolph St PierreDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.
Alfredo M ValenciaDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0003-2432-9890
Kristin QianDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.
Hayley J ZullowDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA.
Jacob D JaffeBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-9845-1210
Sirano Dhe-PaganonDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.
Tom W MuirDepartment of Chemistry, Princeton University, Princeton, NJ, USA.ORCID http://orcid.org/0000-0001-9635-0344
Cigall KadochDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA, USA. Cigall_kadoch@dfci.harvard.edu.ORCID http://orcid.org/0000-0002-4058-5985
Broad Institute · USDana-Farber Cancer Institute · USHarvard University · USPrinceton University · US

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Shared Resources Core 2: Quantitative Proteomics CoreP01CA196539 · NCI · ROCKEFELLER UNIVERSITY · PI YOUNG, MICHAEL WARREN · 2015 to 2024
$17.6M
Understanding and Targeting Wild-Type SS18 Function and Stability in Synovial SarcomaU54CA231638 · NCI · DANA-FARBER CANCER INST · PI KADOCH, CIGALL · 2018 to 2023
$5.8M
Structure, Function and Applications of InteinsR37GM086868 · NIGMS · PRINCETON UNIVERSITY · PI MUIR, TOM · 2012 to 2021
$5.4M
Structure-activity relationships governing mammalian SWI/SNF chromatin remodeling activity as a function of chromatin stateR01CA259365 · NCI · DANA-FARBER CANCER INST · PI Cigall Kadoch, Tom Muir · 2021 to 2026
$4.2M
Reversing Oncogenic BAF Complex Structure & Function: New Therapeutic ApproachesDP2CA195762 · NCI · DANA-FARBER CANCER INST · PI KADOCH, CIGALL · 2014 to 2014
$2.6M
Cancer-Specific Targeting and Function of Mammalian SWI/SNF (BAF) Chromatin Remodeling ComplexesR01CA237241 · NCI · DANA-FARBER CANCER INST · PI KADOCH, CIGALL · 2019 to 2023
$2.0M
Structure and Function of ATP-Dependent Chromatin Remodeling Complexes in Human CancerK99CA237855 · NCI · DANA-FARBER CANCER INST · PI MASHTALIR, NAZAR · 2019 to 2020
$278k
NCI NIH HHS DP2 CA195762NCI NIH HHS K99 CA237855NCI NIH HHS P01 CA196539NCI NIH HHS R01 CA237241NCI NIH HHS R01 CA259365NCI NIH HHS U54 CA231638NIGMS NIH HHS R37 GM086868NIGMS NIH HHS T32 GM007753
6 · The paper itself

Abstract

Interactions between chromatin-associated proteins and the histone landscape play major roles in dictating genome topology and gene expression. Cancer-specific fusion oncoproteins, which display unique chromatin localization patterns, often lack classical DNA-binding domains, presenting challenges in identifying mechanisms governing their site-specific chromatin targeting and function. Here we identify a minimal region of the human SS18-SSX fusion oncoprotein (the hallmark driver of synovial sarcoma) that mediates a direct interaction between the mSWI/SNF complex and the nucleosome acidic patch. This binding results in altered mSWI/SNF composition and nucleosome engagement, driving cancer-specific mSWI/SNF complex targeting and gene expression. Furthermore, the C-terminal region of SSX confers preferential affinity to repressed, H2AK119Ub-marked nucleosomes, underlying the selective targeting to polycomb-marked genomic regions and synovial sarcoma-specific dependency on PRC1 function. Together, our results describe a functional interplay between a key nucleosome binding hub and a histone modification that underlies the disease-specific recruitment of a major chromatin remodeling complex.

Indexed as

Cell Line, TumorChromosomal Proteins, Non-HistoneHEK293 CellsHistonesHumansModels, MolecularNeoplasm ProteinsNucleosomesOncogene Proteins, FusionProtein ConformationProto-Oncogene ProteinsRepressor ProteinsSarcoma, SynovialTranscription FactorsUbiquitinationUbiquitinschromatin conjugate protein A24Chromosomal Proteins, Non-HistoneHistonesNeoplasm ProteinsNucleosomesOncogene Proteins, FusionProto-Oncogene ProteinsRepressor ProteinsSS18 protein, humanSS18-SSX1 fusion proteinSWI-SNF-B chromatin-remodeling complexsynovial sarcoma X breakpoint proteinsTranscription FactorsUbiquitins

Identifiers

PMID32747783
PMCPMC7714695
OpenAlexW3047204491

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.