Evidence map›Paper›PMID 32744436›Full record

ArticleMolecular genetics & genomic medicine2020

Single-cell RNA sequencing analysis of human kidney reveals the presence of ACE2 receptor: A potential pathway of COVID-19 infection.

Qiyu He, Tsz N Mok, Liang Yun, Chengbo He, Jieruo Li, Jinghua Pan

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
0.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Pathological Sequelae of SARS-CoV-2: A Review for Clinicians.The Yale journal of biology and medicine · 2024
    Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Single-cell RNA sequencing for the study of kidney disease.Molecular medicine (Cambridge, Mass.) · 2023
    Review
  10. Ferrets: A powerful model of SARS-CoV-2.Zoological research · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Mechanisms of SARS-CoV-2 Infection-Induced Kidney Injury: A Literature Review.Frontiers in cellular and infection microbiology · 2022
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Qiyu HeFirst Affiliated Hospital of Jinan University, Guangzhou, Guangdong, China.
Tsz N MokFirst Affiliated Hospital of Jinan University, Guangzhou, Guangdong, China.
Liang YunFirst Medical College of Southern Medical University, Guangzhou, Guangdong, China.
Chengbo HeHeyu Health Technology Co, Ltd. Guangzhou, Guangdong, China.
Jieruo LiFirst Affiliated Hospital of Jinan University, Guangzhou, Guangdong, China.
Jinghua PanFirst Affiliated Hospital of Jinan University, Guangzhou, Guangdong, China.ORCID 0000-0003-3741-3397
First Affiliated Hospital of Jinan University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNGuangzhou Electronic Technology (China) · CNSouthern Medical University · CN

Funding

Chair Professor Foundation of the First Affiliated Hospital of JinanUniversity 702023Fundamental Research Business Expenses of Central Universities 11620306Guangdong Basic and Applied Basic Research Fund Project 2019A1515110543
6 · The paper itself

Abstract

backgroundA novel coronavirus called SARS-Cov-2, which shared 82% similarity of genome sequence with SARS-CoV, was found in Wuhan in late December of 2019, causing an epidemic outbreak of novel coronavirus-induced pneumonia with dramatically increasing number of cases. Several organs are vulnerable to COVID-19 infection. Acute kidney injury (AKI) was reported in parts of case-studies reporting characteristics of COVID-19 patients. This study aimed at analyzing the potential route of SARS-Cov-2 entry and mechanism at cellular level.

methodSingle-cell RNA sequencing (scRNA-seq) technology was used to obtain evidence of potential route and ACE2 expressing cell in renal system for underlying pathogenesis of kidney injury caused by COVID-19. The whole process was performed under R with Seurat packages. Canonical marker genes were used to annotate different types of cells.

resultsTen different clusters were identified and ACE2 was mainly expressed in proximal tubule and glomerular parietal epithelial cells. From Gene Ontology (GO) & KEGG enrichment analysis, imbalance of ACE2 expression, renin-angiotensin system (RAS) activation, and neutrophil-related processes were the main issue of COVID-19 leading kidney injury.

conclusionOur study provided the cellular evidence that SARS-Cov-2 invaded human kidney tissue via proximal convoluted tubule, proximal tubule, proximal straight tubule cells, and glomerular parietal cells by means of ACE2-related pathway and used their cellular protease TMPRSS2 for priming.

Indexed as

Acute Kidney InjuryAngiotensin-Converting Enzyme 2Base SequenceCOVID-19HumansKidney GlomerulusKidney Tubules, ProximalPrincipal Component AnalysisReceptors, VirusSARS-CoV-2Sequence Analysis, RNASerine EndopeptidasesSingle-Cell AnalysisACE2 protein, humanAngiotensin-Converting Enzyme 2Receptors, VirusSerine EndopeptidasesTMPRSS2 protein, humanACE2COVID-19kidneySARS-Cov-2scRNA-seq

Identifiers

PMID32744436
PMCPMC7435545
OpenAlexW3012539504

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.