Evidence map›Paper›PMID 32744248›Full record

ArticleActa crystallographica. Section F, Structural biology communications2020

Structural analysis of a novel substrate-free form of the aminoglycoside 6'-N-acetyltransferase from Enterococcus faecium.

Hyunseok Jang, Sunghark Kwon, Chang Sook Jeong, Chang Woo Lee, Jisub Hwang, Kyoung Ho Jung, Jun Hyuck Lee, Hyun Ho Park

Open access · greenAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 55% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Hyunseok JangCollege of Pharmacy, Chung-Ang University, Dongjak-gu, Seoul 06974, Republic of Korea.
Sunghark KwonCollege of Pharmacy, Chung-Ang University, Dongjak-gu, Seoul 06974, Republic of Korea.
Chang Sook JeongUnit of Research for Practical Application, Korea Polar Research Institute, Incheon 21990, Republic of Korea.
Chang Woo LeeUnit of Research for Practical Application, Korea Polar Research Institute, Incheon 21990, Republic of Korea.
Jisub HwangUnit of Research for Practical Application, Korea Polar Research Institute, Incheon 21990, Republic of Korea.
Kyoung Ho JungCollege of Pharmacy, Chung-Ang University, Dongjak-gu, Seoul 06974, Republic of Korea.
Jun Hyuck LeeUnit of Research for Practical Application, Korea Polar Research Institute, Incheon 21990, Republic of Korea.
Hyun Ho ParkCollege of Pharmacy, Chung-Ang University, Dongjak-gu, Seoul 06974, Republic of Korea.
Chung-Ang University · KRKorea Polar Research Institute · KRKorea University of Science and Technology · KR

Funding

National Research Foundation of Korea 2017M3A9D8062960
6 · The paper itself

Abstract

Aminoglycoside acetyltransferases (AACs) catalyze the transfer of an acetyl group between acetyl-CoA and an aminoglycoside, producing CoA and an acetylated aminoglycoside. AAC(6')-Ii enzymes target the amino group linked to the 6' C atom in an aminoglycoside. Several structures of the AAC(6')-Ii from Enterococcus faecium [Ef-AAC(6')-Ii] have been reported to date. However, the detailed mechanism of its enzymatic function remains elusive. In this study, the crystal structure of Ef-AAC(6')-Ii was determined in a novel substrate-free form. Based on structural analysis, it is proposed that Ef-AAC(6')-Ii sequentially undergoes conformational selection and induced fit for substrate binding. These results therefore provide a novel viewpoint on the mechanism of action of Ef-AAC(6')-Ii.

Indexed as

AcetylationAcetyl Coenzyme AAcetyltransferasesAmino Acid MotifsAminoglycosidesBacterial ProteinsBinding SitesCloning, MolecularCrystallography, X-RayEnterococcus faeciumEscherichia coliGene ExpressionGenetic VectorsModels, MolecularProtein BindingProtein Conformation, alpha-HelicalAcetyl Coenzyme AAcetyltransferasesaminoglycoside N(6')-acetyltransferaseAminoglycosidesBacterial ProteinsRecombinant Proteinsacetyl-CoAaminoglycoside acetyltransferasesconformational selectionEnterococcus faeciuminduced fit

Identifiers

PMID32744248
PMCPMC7397467
OpenAlexW3046582238

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.