Evidence map›Paper›PMID 32743959›Full record

ArticleEnvironmental microbiology2020

Resistance to serine in Bacillus subtilis: identification of the serine transporter YbeC and of a metabolic network that links serine and threonine metabolism.

Anika Klewing, Byoung-Mo Koo, Larissa Krüger, Anja Poehlein, Daniel Reuß, Rolf Daniel, Carol A Gross, Jörg Stülke

Open access · hybridAbstract read
In one paragraph

Article in Environmental microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Serum metabolomics identifies biomarkers in radicular cysts.Metabolomics : Official journal of the Metabolomic Society · 2025
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  5. The Transcriptomic Response of Cells of the Thermophilic BacteriumInternational journal of molecular sciences · 2024
    Article
  6. Article
  7. Article
  8. Control of asparagine homeostasis inJournal of bacteriology · 2024
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. The Serine Biosynthesis ofInternational journal of molecular sciences · 2021
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Anika KlewingDepartment of General Microbiology, GZMB, Georg-August-University Göttingen, Grisebachstr. 8, Göttingen, D-37077, Germany.
Byoung-Mo KooDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA, 94158, USA.
Larissa KrügerDepartment of General Microbiology, GZMB, Georg-August-University Göttingen, Grisebachstr. 8, Göttingen, D-37077, Germany.
Anja PoehleinDepartment of Genomic and Applied Microbiology, GZMB, Georg-August-University Göttingen, Göttingen, Germany.
Daniel ReußDepartment of General Microbiology, GZMB, Georg-August-University Göttingen, Grisebachstr. 8, Göttingen, D-37077, Germany.
Rolf DanielDepartment of Genomic and Applied Microbiology, GZMB, Georg-August-University Göttingen, Göttingen, Germany.ORCID 0000-0002-8646-7925
Carol A GrossDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA, 94158, USA.
Jörg StülkeDepartment of General Microbiology, GZMB, Georg-August-University Göttingen, Grisebachstr. 8, Göttingen, D-37077, Germany.ORCID 0000-0001-5881-5390
University of Göttingen · DEUniversity of California, San Francisco · US

Funding

Cellular homeostasis pathways in bacteriaR35GM118061 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GROSS, CAROL ANNE · 2016 to 2025
$9.0M
Deutsche Forschungsgemeinschaft SPP1879European Commission (Rafts4Biotech) 720776NIGMS NIH HHS R35 GM118061
6 · The paper itself

Abstract

The Gram-positive bacterium Bacillus subtilis uses serine not only as a building block for proteins but also as an important precursor in many anabolic reactions. Moreover, a lack of serine results in the initiation of biofilm formation. However, excess serine inhibits the growth of B. subtilis. To unravel the underlying mechanisms, we isolated suppressor mutants that can tolerate toxic serine concentrations by three targeted and non-targeted genome-wide screens. All screens as well as genetic complementation in Escherichia coli identified the so far uncharacterized permease YbeC as the major serine transporter of B. subtilis. In addition to YbeC, the threonine transporters BcaP and YbxG make minor contributions to serine uptake. A strain lacking these three transporters was able to tolerate 100 mM serine whereas the wild type strain was already inhibited by 1 mM of the amino acid. The screen for serine-resistant mutants also identified mutations that result in increased serine degradation and in increased expression of threonine biosynthetic enzymes suggesting that serine toxicity results from interference with threonine biosynthesis.

Indexed as

Metabolic Networks and PathwaysAmino Acid Transport SystemsBacillus subtilisBacterial ProteinsDrug Resistance, BacterialEscherichia coliMutationSerineThreonineAmino Acid Transport SystemsBacterial ProteinsSerineThreonine

Identifiers

PMID32743959
PMCPMC8226366
OpenAlexW3046359819

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.