Evidence map›Paper›PMID 32743148›Full record

ArticleCell surface (Amsterdam, Netherlands)2019

Extensin arabinoside chain length is modulated in elongating cotton fibre.

Xiaoyuan Guo, Bjørn Øst Hansen, Svenning Rune Moeller, Jesper Harholt, Jozef Mravec, William Willats, Bent Larsen Petersen, Peter Ulvskov

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Cell surface (Amsterdam, Netherlands), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Cracking the "Sugar Code": A Snapshot ofFrontiers in plant science · 2021
    Review
  3. Plant ProteinFrontiers in plant science · 2021
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xiaoyuan GuoDepartment of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.
Bjørn Øst HansenMax Planck Institute of Molecular Plant Physiology, Am Muehlenberg 1, Potsdam 14476, Germany.
Svenning Rune MoellerDepartment of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.
Jesper HarholtDepartment of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.
Jozef MravecDepartment of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.
William WillatsDepartment of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.
Bent Larsen PetersenDepartment of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.
Peter UlvskovDepartment of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cotton fibre provides a unicellular model system for studying cell expansion and secondary cell wall deposition. Mature cotton fibres are mainly composed of cellulose while the walls of developing fibre cells contain a variety of polysaccharides and proteoglycans required for cell expansion. This includes hydroxyproline-rich glycoproteins (HRGPs) comprising the subgroup, extensins. In this study, extensin occurrence in cotton fibres was assessed using carbohydrate immunomicroarrays, mass spectrometry and monosaccharide profiling. Extensin amounts in three species appeared to correlate with fibre quality. Fibre cell expression profiling of the four cotton cultivars, combined with extensin arabinoside chain length measurements during fibre development, demonstrated that arabinoside side-chain length is modulated during development. Implications and mechanisms of extensin side-chain length dynamics during development are discussed.

Indexed as

AGPs, arabinogalactan proteinsCoMPPCoMPP, comprehensive microarray polymer profilingCotton fibreCotton fibre qualityCrRLK1L, Catharanthus roseus receptor-like1-like kinaseDPA, days post anthesisExAD, arabinosyltransferase named after the mutant Extensin Arabinose DeficientExtensin arabinoside metabolismEXTs, extensinsGH, glycoside hydrolaseHPAT, hydroxyproline arabinosyltransferaseHRGPHRGPs, hydroxyproline-rich glycoproteinsHyp-Aran, extensin side-chain of length nLRX, leucine-rich repeat extensinsPCW, primary cell wallRRA, arabinosyltransferase named after the mutant Reduced Residual ArabinoseSCW, secondary cell wallSGT, serine galactosyltransferaseTranscriptomicsXEG113, arabinosyltransferase named after the mutant Xyloglucan Endo-Glucanase resistant mutant 113

Identifiers

PMID32743148
PMCPMC7388976

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.