Evidence map›Paper›PMID 32742654›Full record

ArticleClinical & translational immunology2020

Associations of viral ribonucleic acid (RNA) shedding patterns with clinical illness and immune responses in Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection.

Pei Hua Lee, Woo Chiao Tay, Stephanie Sutjipto, Siew-Wai Fong, Sean Wei Xiang Ong, Wycliff Enli Wei, Yi-Hao Chan, Li Min Ling, Barnaby E Young, Matthias Paul Hs Toh and 5 more

Open access · goldAbstract read
In one paragraph

Article in Clinical & translational immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
0.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 38 citations in OpenAlex.

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  10. The correlation between viral shedding duration and blood biomarkers in COVID-19-infected patients.Journal of research in medical sciences : the official journal of Isfahan University of Medical Sciences · 2022
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  18. Seroprevalence of antibodies to SARS-CoV-2 among blood donors in the early months of the pandemic in Saudi Arabia.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Pei Hua LeeNational Centre for Infectious Diseases Singapore.ORCID https://orcid.org/0000-0003-2269-742X
Woo Chiao TayTan Tock Seng Hospital Singapore.
Stephanie SutjiptoNational Centre for Infectious Diseases Singapore.
Siew-Wai FongSingapore Immunology Network Agency for Science, Technology and Research Singapore.
Sean Wei Xiang OngNational Centre for Infectious Diseases Singapore.ORCID https://orcid.org/0000-0002-8570-436X
Wycliff Enli WeiNational Centre for Infectious Diseases Singapore.
Yi-Hao ChanSingapore Immunology Network Agency for Science, Technology and Research Singapore.
Li Min LingNational Centre for Infectious Diseases Singapore.
Barnaby E YoungNational Centre for Infectious Diseases Singapore.
Matthias Paul Hs TohNational Centre for Infectious Diseases Singapore.
Laurent ReniaSingapore Immunology Network Agency for Science, Technology and Research Singapore.
Lisa Fp NgSingapore Immunology Network Agency for Science, Technology and Research Singapore.
Yee-Sin LeoNational Centre for Infectious Diseases Singapore.
David C LyeNational Centre for Infectious Diseases Singapore.
Tau Hong LeeNational Centre for Infectious Diseases Singapore.
Tan Tock Seng Hospital · SGAgency for Science, Technology and Research · SGNational Centre for Infectious Diseases · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesA wide range of duration of viral RNA shedding in patients infected with Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has been observed. We aimed to investigate factors associated with prolonged and intermittent viral RNA shedding in a retrospective cohort of symptomatic COVID-19 patients.

methodsDemographic, clinical and laboratory data from hospitalised COVID-19 patients from a single centre with two consecutive negative respiratory reverse transcription-polymerase chain reaction (RT-PCR) results were extracted from electronic medical records. Kaplan-Meier survival curve analysis was used to assess the effect of clinical characteristics on the duration and pattern of shedding. Plasma levels of immune mediators were measured using Luminex multiplex microbead-based immunoassay.

resultsThere were 201 symptomatic patients included. Median age was 49 years (interquartile range 16-61), and 52.2% were male. Median RNA shedding was 14 days (IQR 9-18). Intermittent shedding was observed in 77 (38.3%). We did not identify any factor associated with prolonged or intermittent viral RNA shedding. Duration of shedding was inversely correlated with plasma levels of T-cell cytokines IL-1β and IL-17A at the initial phase of infection, and patients had lower levels of pro-inflammatory cytokines during intermittent shedding.

conclusionsLess active T-cell responses at the initial phase of infection were associated with prolonged viral RNA shedding, suggesting that early immune responses are beneficial to control viral load and prevent viral RNA shedding. Intermittent shedding is common and may explain re-detection of viral RNA in recovered patients.

Indexed as

COVID‐19cytokinesimmune responsesSARS‐CoV‐2viral RNA shedding

Identifiers

PMID32742654
PMCPMC7385430
OpenAlexW3045743418

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.