Evidence map›Paper›PMID 32738032›Full record

ArticleMolecular genetics & genomic medicine2020

Functional and genetic analyses of ZYG11B provide evidences for its involvement in OAVS.

Angèle Tingaud-Sequeira, Aurélien Trimouille, Sandrine Marlin, Estelle Lopez, Marie Berenguer, Souad Gherbi, Benoit Arveiler, Didier Lacombe, Caroline Rooryck

Open access · goldAbstract readCase Reports
In one paragraph

Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Familial Oculoauriculovertebral Spectrum: A Genomic Investigation of Autosomal Dominant Inheritance.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2026
    Article
  4. Article
  5. Article
  6. International journal of molecular sciences · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. [Genetic characteristics of microtia-associated syndromes in neonates].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2022
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Angèle Tingaud-SequeiraMaladies Rares: Génétique et Métabolisme (MRGM), U 1211 INSERM, Univ. Bordeaux, Bordeaux, France.ORCID 0000-0003-1103-2158
Aurélien TrimouilleMaladies Rares: Génétique et Métabolisme (MRGM), U 1211 INSERM, Univ. Bordeaux, Bordeaux, France.ORCID 0000-0002-3457-5684
Sandrine MarlinDépartement de Génétique, Centre de Référence des Surdités Génétiques, Institut Imagine, Hôpital Universitaire Necker-Enfants-Malades, Paris, France.ORCID 0000-0002-4115-9806
Estelle LopezMaladies Rares: Génétique et Métabolisme (MRGM), U 1211 INSERM, Univ. Bordeaux, Bordeaux, France.
Marie BerenguerMaladies Rares: Génétique et Métabolisme (MRGM), U 1211 INSERM, Univ. Bordeaux, Bordeaux, France.
Souad GherbiDépartement de Génétique, Centre de Référence des Surdités Génétiques, Institut Imagine, Hôpital Universitaire Necker-Enfants-Malades, Paris, France.
Benoit ArveilerMaladies Rares: Génétique et Métabolisme (MRGM), U 1211 INSERM, Univ. Bordeaux, Bordeaux, France.
Didier LacombeMaladies Rares: Génétique et Métabolisme (MRGM), U 1211 INSERM, Univ. Bordeaux, Bordeaux, France.
Caroline RooryckMaladies Rares: Génétique et Métabolisme (MRGM), U 1211 INSERM, Univ. Bordeaux, Bordeaux, France.ORCID 0000-0002-9789-3591
Université de Bordeaux · FRInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Oculo-Auriculo-Vertebral Spectrum (OAVS) or Goldenhar Syndrome is an embryonic developmental disorder characterized by hemifacial microsomia associated with auricular, ocular and vertebral malformations. The clinical heterogeneity of this spectrum and its incomplete penetrance limited the molecular diagnosis. In this study, we describe a novel causative gene, ZYG11B.

methodsA sporadic case of OAVS was analyzed by whole exome sequencing in trio strategy. The identified candidate gene, ZYG11B, was screened in 143 patients by next generation sequencing. Overexpression and immunofluorescence of wild-type and mutated ZYG11B forms were performed in Hela cells. Moreover, morpholinos were used for transient knockdown of its homologue in zebrafish embryo.

resultsA nonsense de novo heterozygous variant in ZYG11B, (NM_024646, c.1609G>T, p.Glu537*) was identified in a single OAVS patient. This variant leads in vitro to a truncated protein whose subcellular localization is altered. Transient knockdown of the zebrafish homologue gene confirmed its role in craniofacial cartilages architecture and in notochord development. Moreover, ZYG11B expression regulates a cartilage master regulator, SOX6, and is regulated by Retinoic Acid, a known developmental toxic molecule leading to clinical features of OAVS.

conclusionBased on genetic, cellular and animal model data, we proposed ZYG11B as a novel rare causative gene for OAVS.

Indexed as

AdolescentAnimalsCell Cycle ProteinsCodon, NonsenseExomeGoldenhar SyndromeHeLa CellsHeterozygoteHumansMaleNotochordSOXD Transcription FactorsTretinoinZebrafishCell Cycle ProteinsCodon, NonsenseSOX6 protein, humanSOXD Transcription FactorsTretinoinZYG11A protein, humancraniofacial anomaliesetiologygeneticsGoldenharhemifacial microsomiaOAVSubiquitine ligasewavy notochordZYG11B

Identifiers

PMID32738032
PMCPMC7549578
OpenAlexW3046891427

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.