Evidence map›Paper›PMID 32735789›Full record

ArticleBiochimica et biophysica acta. Biomembranes2020

CD81 extracted in SMALP nanodiscs comprises two distinct protein populations within a lipid environment enriched with negatively charged headgroups.

Hoor Ayub, Michelle Clare, Ivana Milic, Nikola P Chmel, Heike Böning, Andrew Devitt, Thomas Krey, Roslyn M Bill, Alice J Rothnie

Abstract read
In one paragraph

Article in Biochimica et biophysica acta. Biomembranes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Discovery of Therapeutic Antibodies Targeting Complex Multi-Spanning Membrane Proteins.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2024
    Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Detergent-Free Membrane Protein Purification Using SMA Polymer.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  11. Membrane Protein Production in the Yeast P. pastoris.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  12. Article
  13. The high-throughput production of membrane proteins.Emerging topics in life sciences · 2021
    Article
  14. Biological insights from SMA-extracted proteins.Biochemical Society transactions · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hoor AyubCollege of Health & Life Sciences, Aston University, Aston Triangle, Birmingham B4 7ET, UK.
Michelle ClareCollege of Health & Life Sciences, Aston University, Aston Triangle, Birmingham B4 7ET, UK.
Ivana MilicCollege of Health & Life Sciences, Aston University, Aston Triangle, Birmingham B4 7ET, UK.
Nikola P ChmelDepartment of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.
Heike BöningGerman Center for Infection Research (DZIF) Hannover-Braunschweig Site and Institute of Virology, Hannover Medical School, 30625 Hannover, Germany.
Andrew DevittCollege of Health & Life Sciences, Aston University, Aston Triangle, Birmingham B4 7ET, UK.
Thomas KreyGerman Center for Infection Research (DZIF) Hannover-Braunschweig Site and Institute of Virology, Hannover Medical School, 30625 Hannover, Germany; Center of Structural and Cell Biology in Medicine, Institute of Biochemistry, University of Luebeck, Luebeck, Germany; Centre for Structural Systems Biology (CSSB), Hamburg, Germany.
Roslyn M BillCollege of Health & Life Sciences, Aston University, Aston Triangle, Birmingham B4 7ET, UK. Electronic address: r.m.bill@aston.ac.uk.
Alice J RothnieCollege of Health & Life Sciences, Aston University, Aston Triangle, Birmingham B4 7ET, UK. Electronic address: a.rothnie@aston.ac.uk.

Funding

Biotechnology & Biosciences Research Council BB/M006298/1Biotechnology & Biosciences Research Council BB/N007417/1Biotechnology & Biosciences Research Council BB/S00324X/1
6 · The paper itself

Abstract

Tetraspanins exert a wide range of cellular functions of broad medical importance. Despite this, their biophysical characteristics are incompletely understood. Only two high-resolution structures of full-length tetraspanins have been solved. One is that of human CD81, which is involved in the infectivity of human pathogens including influenza, HIV, the malarial Plasmodium parasite and hepatitis C virus (HCV). The CD81 crystal structure identifies a cholesterol-binding pocket, which has been suggested to be important in the regulation of tetraspanin function. Here we investigate the use of styrene-maleic anhydride co-polymers (SMA) for the solubilisation and purification of CD81 within a lipid environment. When CD81 was expressed in the yeast Pichia pastoris, it could be solubilised and purified using SMA2000. This SMALP-encapsulated CD81 retained its native folded structure, as determined by the binding of two conformation-sensitive anti-CD81 antibodies. Analysis by size exclusion chromatography revealed two distinct populations of CD81, only one of which bound the HCV glycoprotein, E2. Optimization of expression and buffer conditions increased the proportion of E2-binding competent CD81 protein. Mass spectrometry analysis indicated that the lipid environment surrounding CD81 is enriched with negatively charged lipids. These results establish a platform to study the influence of protein-lipid interactions in tetraspanin biology.

Indexed as

Models, MolecularProtein FoldingCrystallography, X-RayHumansRecombinant ProteinsSaccharomycetalesTetraspanin 28CD81 protein, humanRecombinant ProteinsTetraspanin 28Membrane proteinPurificationSMALPSolubilisationStabilityTetraspanin

Identifiers

PMID32735789
PMCPMC7456796

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.