Evidence map›Paper›PMID 32735661›Full record

ArticleNucleic acids research2020

Insights into the global effect on Staphylococcus aureus growth arrest by induction of the endoribonuclease MazF toxin.

Roberto Sierra, Julien Prados, Olesya O Panasenko, Diego O Andrey, Betty Fleuchot, Peter Redder, William L Kelley, Patrick H Viollier, Adriana Renzoni

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.2field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

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  5. Discovery of Bactericidal Proteins fromAntibiotics (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Roberto SierraService of Infectious Diseases, Department of Medical Specialties, Geneva University Hospitals and Medical School, Geneva 1211, Switzerland.
Julien PradosDepartment of Microbiology and Molecular Medicine, University of Geneva, Geneva 1211, Switzerland.
Olesya O PanasenkoService of Infectious Diseases, Department of Medical Specialties, Geneva University Hospitals and Medical School, Geneva 1211, Switzerland.
Diego O AndreyService of Infectious Diseases, Department of Medical Specialties, Geneva University Hospitals and Medical School, Geneva 1211, Switzerland.
Betty FleuchotDepartment of Microbiology and Molecular Medicine, University of Geneva, Geneva 1211, Switzerland.
Peter RedderCentre de Biologie Intégrative, Université de Toulouse III, Toulouse 31400, France.
William L KelleyDepartment of Microbiology and Molecular Medicine, University of Geneva, Geneva 1211, Switzerland.
Patrick H ViollierDepartment of Microbiology and Molecular Medicine, University of Geneva, Geneva 1211, Switzerland.
Adriana RenzoniService of Infectious Diseases, Department of Medical Specialties, Geneva University Hospitals and Medical School, Geneva 1211, Switzerland.
University of Geneva · CHUniversité Toulouse III - Paul Sabatier · FRUniversity Hospital of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A crucial bacterial strategy to avoid killing by antibiotics is to enter a growth arrested state, yet the molecular mechanisms behind this process remain elusive. The conditional overexpression of mazF, the endoribonuclease toxin of the MazEF toxin-antitoxin system in Staphylococcus aureus, is one approach to induce bacterial growth arrest, but its targets remain largely unknown. We used overexpression of mazF and high-throughput sequence analysis following the exact mapping of non-phosphorylated transcriptome ends (nEMOTE) technique to reveal in vivo toxin cleavage sites on a global scale. We obtained a catalogue of MazF cleavage sites and unearthed an extended MazF cleavage specificity that goes beyond the previously reported one. We correlated transcript cleavage and abundance in a global transcriptomic profiling during mazF overexpression. We observed that MazF affects RNA molecules involved in ribosome biogenesis, cell wall synthesis, cell division and RNA turnover and thus deliver a plausible explanation for how mazF overexpression induces stasis. We hypothesize that autoregulation of MazF occurs by directly modulating the MazEF operon, such as the rsbUVW genes that regulate the sigma factor SigB, including an observed cleavage site on the MazF mRNA that would ultimately play a role in entry and exit from bacterial stasis.

Indexed as

Anti-Bacterial AgentsCell ProliferationDNA-Binding ProteinsEndoribonucleasesEscherichia coliEscherichia coli ProteinsHumansOperonRNA, MessengerStaphylococcal InfectionsStaphylococcus aureusSubstrate SpecificityToxin-Antitoxin SystemsTranscriptomeAnti-Bacterial AgentsDNA-Binding ProteinsEndoribonucleasesEscherichia coli ProteinsMazF protein, E coliRNA, Messenger

Identifiers

PMID32735661
PMCPMC7470975
OpenAlexW3046287237

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.