ArticleJournal of veterinary science2020
Genetic diversity of the H5N1 viruses in live bird markets, Indonesia.
Article in Journal of veterinary science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.
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Who cites it
7 citing papers in PubMed.
- Avian Influenza at the Wild Bird-Poultry Interface: An Asia-Focused Review with Ecological Risk Scenarios for China.Animals : an open access journal from MDPI · 2026Review
- Genomic surveillance of influenza A virus in live bird markets during the COVID-19 pandemic.Veterinary world · 2025Article
- Determinants for the presence of avian influenza virus in live bird markets in Bangladesh: Towards an easy fix of a looming one health issue.One health (Amsterdam, Netherlands) · 2023Article
- Prevalence and risk factors for avian influenza virus (H5 and H9) contamination in peri-urban and rural live bird markets in Bangladesh.Frontiers in public health · 2023Article
- Improving siRNA design targeting nucleoprotein gene as antiviral against the Indonesian H5N1 virus.Journal of veterinary science · 2022Article
- Avian influenza overview May - August 2020.EFSA journal. European Food Safety Authority · 2020Article
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Authors and funding
4 authors.
Funding
Abstract
backgroundThe live bird market (LBM) plays an important role in the dynamic evolution of the avian influenza H5N1 virus.
objectivesThe main objective of this study was to monitor the genetic diversity of the H5N1 viruses in LBMs in Indonesia.
methodsTherefore, the disease surveillance was conducted in the area of Banten, West Java, Central Java, East Java, and Jakarta Province, Indonesia from 2014 to 2019. Subsequently, the genetic characterization of the H5N1 viruses was performed by sequencing all 8 segments of the viral genome.
resultsAs a result, the H5N1 viruses were detected in most of LBMs in both bird' cloacal and environmental samples, in which about 35% of all samples were positive for influenza A and, subsequently, about 52% of these samples were positive for H5 subtyping. Based on the genetic analyses of 14 viruses isolated from LBMs, genetic diversities of the H5N1 viruses were identified including clades 2.1.3 and 2.3.2 as typical predominant groups as well as reassortant viruses between these 2 clades.
conclusionsAs a consequence, zoonotic transmission to humans in the market could be occurred from the exposure of infected birds and/or contaminated environments. Moreover, new virus variants could emerge from the LBM environment. Therefore, improving pandemic preparedness raised great concerns related to the zoonotic aspect of new influenza variants because of its high adaptivity and efficiency for human infection.
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